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Search results 8101 to 8200 out of 30763 for seed protein

Category restricted to ProteinDomain (x)

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Categories

Category: ProteinDomain
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Type Details Score
Protein Domain
IPR021473
Name: Protein of unknown function DUF3126
Type: Family
Description: This family of proteins with unknown function appear to be restricted to Alphaproteobacteria.
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Protein Domain
IPR021474
Name: Protein of unknown function DUF3127
Type: Family
Description: This bacterial family of proteins has no known function.
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Protein Domain
IPR045436
Name: Protein of unknown function DUF6507
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria.
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Protein Domain
IPR021478
Name: Protein of unknown function DUF3131
Type: Family
Description: This bacterial family of proteins has no known function.
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Protein Domain
IPR033458
Name: Protein of unknown function DUF5134
Type: Family
Description: Proteins in this family are uncharacterised, but have been identified as members of a gene cluster for the synthesis of the tetramic-acid antibiotic streptolydigin, which inhibits bacterial RNA polymerase (RNAP) [ ].
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Protein Domain
IPR033457
Name: Protein of unknown function DUF5133
Type: Family
Description: This is a family of uncharacterised proteins from Streptomyces. from S. parvulus has been identified as part of a borrelidin synthesis genomic cluster. Borrelidin is a polyketide antibiotic [ , ].
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Protein Domain
IPR033456
Name: Protein of unknown function DUF5132
Type: Family
Description: Proteins in this family are uncharacterised. A members of this family, , has been identified as part of a gene cluster for the synthesis of Ansamitocin [ ].
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Protein Domain
IPR045499
Name: Protein of unknown function DUF6492
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria and eukaryotes.
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Protein Domain
IPR045493
Name: Protein of unknown function DUF6435
Type: Family
Description: This family of proteins found in bacteria is functionally uncharacterised. Proteins in this family are approximately 60 amino acids in length and are predicted to have a coiled-coil structure. There are two conserved motifs: KxLxxxY and EA.
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Protein Domain
IPR045491
Name: Protein of unknown function DUF6433
Type: Family
Description: This family of proteins is functionally uncharacterised, mainly found in phages. They contain the conserved NFD and LEGL motifs.
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Protein Domain
IPR045490
Name: Protein of unknown function DUF6432
Type: Family
Description: This family of proteins found in archaea is functionally uncharacterised. Members of this entry are thought to be transcriptional regulators.
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Protein Domain
IPR045471
Name: Protein of unknown function DUF6494
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. There is a conserved SQREIE sequence motif.
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Protein Domain
IPR045470
Name: Protein of unknown function DUF6495
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria.
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Protein Domain
IPR008527
Name: Protein of unknown function DUF809
Type: Family
Description: This family consists of several proteins of unknown function from Raphanus sativus (Radish) and Brassica napus (Rape).
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Protein Domain
IPR008524
Name: Protein of unknown function DUF806
Type: Family
Description: This family consists of several Siphovirus and Lactococcus proteins of unknown function. The viral sequences are thought to be tail component proteins.
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Protein Domain
IPR008523
Name: Protein of unknown function DUF805
Type: Family
Description: This family consists of several bacterial proteins of unknown function.
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Protein Domain
IPR021500
Name: Protein of unknown function DUF3156
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Proteobacteria.
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Protein Domain
IPR021501
Name: Protein of unknown function DUF3157
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
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Protein Domain
IPR021502
Name: Protein of unknown function DUF3158
Type: Family
Description: Some members in this family of proteins are annotated as integrase regulator R however this cannot be confirmed. This family of proteins with unknown function appear to be restricted to Proteobacteria.
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Protein Domain
IPR021506
Name: Protein of unknown function DUF3165
Type: Family
Description: Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
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Protein Domain
IPR021509
Name: Protein of unknown function DUF3169
Type: Family
Description: Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
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Protein Domain
IPR008536
Name: Protein of unknown function DUF818
Type: Family
Description: This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
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Protein Domain
IPR008535
Name: Protein of unknown function DUF817
Type: Family
Description: This family consists of several bacterial proteins of unknown function.
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Protein Domain
IPR008533
Name: Protein of unknown function DUF815
Type: Family
Description: This entry represents a family of bacterial proteins of unknown function. Many members contain an AAA+ ATPase domain ( ).
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Protein Domain
IPR008505
Name: Protein of unknown function DUF787
Type: Family
Description: This entry consists of several hypothetical proteins of unknown function from Borrelia species. They may be proteinases, as the majority contain a propeptide proteinase inhibitor domain which is associated with both serine and metallopeptidases.
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Protein Domain
IPR011975
Name: Phenylacetic acid degradation protein PaaN2
Type: Family
Description: This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation [ ] which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in []. This enzyme is related to aldehyde dehydrogenase family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate entry, .
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Protein Domain
IPR011973
Name: Phenylacetic acid degradation protein PaaD
Type: Family
Description: This members of this family belong to the thioesterase superfamily , and are nearly always found adjacent to other genes of the phenylacetic acid degradation pathway [ ]. Their function is currently unknown, but a role as thioesterases is suggested.
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Protein Domain
IPR011974
Name: Phenylacetic acid degradation protein PaaY
Type: Family
Description: Members of this family are located next to other genes organised into apparent operons for phenylacetic acid degradation [ ]. PaaY is located near the end of these gene clusters and often next to PaaX, a transcriptional regulator. PaaY has a thioesterase activity involved in the efficient growth in phenylacetic acid which is responsible for the degradation of aromatic compounds in bacteria [].
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Protein Domain
IPR021305
Name: Protein of unknown function DUF2880
Type: Family
Description: This bacterial family of proteins has no known function.
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Protein Domain
IPR021306
Name: Protein of unknown function DUF2878
Type: Family
Description: This bacterial family of proteins has no known function. Some members annotate the proteins as the permease component of a Mn2+/Zn2+ transport system however this cannot be confirmed.
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Protein Domain
IPR023967
Name: Conserved hypothetical protein CHP03996, oxidoreductase
Type: Family
Description: This protein family occurs in the vicinity of the putative mycofactocin biosynthesis operon in a number of Actinobacteria such as Frankia sp. and Rhodococcus sp. Family members contain a TIM-barrel fold commonly found in NADH:flavin oxidoreductase/NADH oxidase enzymes that use FMN/FAD as cofactor.
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Protein Domain
IPR021307
Name: Protein of unknown function DUF2884
Type: Family
Description: Some members in this bacterial family of proteins are annotated as YggN which currently has no known function.
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Protein Domain
IPR008303
Name: Putative methanogenesis marker protein 14
Type: Family
Description: Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
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Protein Domain
IPR023941
Name: Glutathione-regulated potassium-efflux system protein KefC
Type: Family
Description: The kefC gene encodes a potassium-efflux system that is regulated by glutathione metabolites [ , , ]. Full activation of KefC also requires a soluble regulatory protein, KefF [, ]. KefC belongs to the monovalent cation:proton antiporter 2(CPA2) transporter family TC 2.A.37 (http://www.tcdb.org/search/result.php?tc=2.A.37).
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Protein Domain
IPR011966
Name: Phenylacetic acid degradation protein PaaN
Type: Family
Description: This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation [ ] which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardised in []. This enzyme is related to aldehyde dehydrogenases.
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Protein Domain
IPR021340
Name: Protein of unknown function DUF2957
Type: Family
Description: Some members annotate the proteins to be putative lipoproteins however this cannot be confirmed. Currently no function is known for this family of proteins.
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Protein Domain
IPR021341
Name: Protein of unknown function DUF2958
Type: Family
Description: Some members are annotated as lipoproteins however this cannot be confirmed. This family of proteins has no known function.
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Protein Domain
IPR021342
Name: Protein of unknown function DUF2959
Type: Family
Description: DUF2959 is a family of uncharacterised proteins.
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Protein Domain
IPR021343
Name: Protein of unknown function DUF2960
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
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Protein Domain
IPR021344
Name: Protein of unknown function DUF2970
Type: Family
Description: This short family is conserved in Proteobacteria. The function is not known.
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Protein Domain
IPR021345
Name: Protein of unknown function DUF2961
Type: Family
Description: This family of proteins has no known function.
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Protein Domain
IPR021347
Name: Protein of unknown function DUF2964
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Proteobacteria.
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Protein Domain
IPR021349
Name: Protein of unknown function DUF2967
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Drosophila.
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Protein Domain
IPR021330
Name: Protein of unknown function DUF2939
Type: Family
Description: This bacterial family of proteins has no known function.
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Protein Domain
IPR021332
Name: Protein of unknown function DUF2944
Type: Family
Description: This family of proteins with unknown function appear to be restricted to Proteobacteria.
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Protein Domain
IPR021334
Name: Protein of unknown function DUF2947
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
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Protein Domain
IPR021335
Name: Protein of unknown function DUF2948
Type: Family
Description: This family of proteins with unknown function appear to be restricted to Proteobacteria.
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Protein Domain
IPR021336
Name: Protein of unknown function DUF2949
Type: Family
Description: This family of proteins with unknown function appear to be restricted to Cyanobacteria.
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Protein Domain
IPR021337
Name: Protein of unknown function DUF2951
Type: Family
Description: This family of proteins has no known function. It has a highly conserved sequence.
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Protein Domain
IPR021338
Name: Protein of unknown function DUF2953
Type: Family
Description: This family of proteins has no known function.
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Protein Domain
IPR021339
Name: Protein of unknown function DUF2956
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
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Protein Domain
IPR008343
Name: Mitogen-activated protein (MAP) kinase phosphatase
Type: Family
Description: MAP Kinase Phosphatases (MKPs) are members of the dual specificity phosphatase family [ , ]. MKPs constitute a class of phosphatases that reverse the activation of MAP (mitogen activated protein) kinases by dephosphorylating critical tyrosineand threonine residues [ ]. This regulation is mediated via interaction of aKinase Interaction Motif (KIM) with the common docking domain of the kinase - this motif is shared with a number of other protein families that interactwith MAP kinases: these include kinases (MEKs), phosphatases (PTP-SL) and transcription factors (Elk1). MKPs also share an active site motif with theprotein tyrosine phosphatases (PTPs). Different MKPs exhibit specificity towards different members of the MAP kinase family [].The structure of the MPK catalytic domain is similar to that of the PTPs - the fold exhibits a complex mixed alpha-/beta-architecture. Thecatalytic mechanism involves a general acid (Asp92 in 1VHR) and a catalytic cysteine (130 in 1VHR), which acts as a nucleophile.
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Protein Domain
IPR008349
Name: Mitogen-activated protein (MAP) kinase, ERK1/2
Type: Family
Description: Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:Serine/threonine-protein kinasesTyrosine-protein kinasesDual specificity protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)Protein kinase function is evolutionarily conserved from Escherichia coli to human [ ]. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases [].MAP (Mitogen Activated Protein) kinases participate in kinase cascades, whereby at least 3 protein kinases act in series, culminating in activationof MAP kinase [ , ]. MAP kinases are activated by dual phosphorylation on both tyrosine and threonine residues of a conserved TXY motif.ERKs (Extracellularly Regulated Kinases) belong to the family of MAP kinases. ERK1 (also known as MAPK3) and ERK2 (also known as MAPK1) are proteins of 43 and 41kDa respectively. They are ~85% identical, even higher levels of similarity being seen in substrate bindingregions. Both are ubiquitously expressed, although levels vary from tissue to tissue. They are activated, for example, by serum, growth factorsand cytokines. They phosphorylate both cytoskeletal proteins and transcription factors, resulting ultimately in cell growth. Substrates carrya PX(T/S)P motif; other such "docking domains"also exist within ERK, which interact with specific motifs in the substrate: e.g., ERK1 and ERK2 possess2 DXXD docking sites capable of interaction with a Kinase Interaction Motif (KIM), which can be found on activators (MAPKK), inhibitors (PTP-SL and dualspecificity phosphatases) and substrates (Elk-1).
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Protein Domain
IPR023982
Name: Conserved hypothetical protein CHP04029, CMD-like
Type: Family
Description: Sequences in this family occur as the N-terminal domain of a fusion protein with a C-terminal peroxidase-like protein, or as discrete proteins encoded next to a peroxidase-like protein. The two partners regularly are encoded near to, and in the same genomes as, a putative FMN-dependent luciferase-like monooxygenase (LLM) ( ), and an ABC transporter in which models the substrate-binding protein.
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Protein Domain
IPR021320
Name: Protein of unknown function DUF2905
Type: Family
Description: This is a family of bacterial proteins conserved of unknown function.
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Protein Domain
IPR021321
Name: Protein of unknown function DUF2922
Type: Family
Description: This bacterial family of proteins has no known function.
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Protein Domain
IPR021322
Name: Protein of unknown function DUF2924
Type: Family
Description: This family of proteins has not been functionally characterised.
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Protein Domain
IPR021323
Name: Protein of unknown function DUF2927
Type: Family
Description: This family is conserved in Proteobacteria. Several members are described as being putative lipoproteins, but otherwise the function is not known.
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Protein Domain
IPR021324
Name: Protein of unknown function DUF2929
Type: Family
Description: This family of proteins with unknown function appears occur predominantly in Firmicutes.
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Protein Domain
IPR021326
Name: Protein of unknown function DUF2931
Type: Family
Description: Some members in this family of proteins are annotated as lipoproteins however this cannot be confirmed. Currently, there is no known function.
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Protein Domain
IPR023987
Name: Conserved hypothetical protein CHP03977, oxidoreductase
Type: Family
Description: This protein family occurs in the vicinity of the the putative mycofactocin biosynthesis operon in a number of Actinobacteria such as Frankia sp. and Rhodococcus sp., in Pelotomaculum thermopropionicum SI (Firmicutes), and in Geobacter uraniireducens Rf4 (Deltaproteobacteria). Family members contain a TIM-barrel fold commonly found in NADH:flavin oxidoreductase/NADH oxidase enzymes that use FMN/FAD as cofactor.
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Protein Domain
IPR021327
Name: Protein of unknown function DUF2934
Type: Family
Description: This bacterial family of proteins has no known function.
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Protein Domain
IPR021328
Name: Protein of unknown function DUF2935
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Firmicutes.
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Protein Domain
IPR021329
Name: Protein of unknown function DUF2938
Type: Family
Description: This bacterial and archaeal family of proteins has no known function. Some members are thought to be membrane proteins, however this has not been confirmed.
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Protein Domain
IPR008351
Name: Mitogen-activated protein (MAP) kinase, JNK
Type: Family
Description: MAP (Mitogen Activated Protein) kinases participate in kinase cascades,whereby at least 3 protein kinases act in series, culminating in activation of MAP kinase []. MAP kinases are activated by dual phosphorylationon both tyrosine and threonine residues of a conserved TXY motif. JNK (Jun N-terminal Kinase), also known as Stress Activated Protein Kinase(SAPK), belongs to the family of MAP kinases [ ]. JNKs are activated by cytokines, certain ligands for GPCRs, agentsthat interfere with DNA and protein synthesis, and to some extent by growth factors, serum and transforming agents. Three genes have beenidentified in humans: JNK1, JNK2 and JNK3. Knockouts of these genes have revealed that JNK1 and/or JNK2 must have a role in both apoptosis and the immune response.This entry represents the JNK MAP kinases. In addition, it matches mitogen-activated protein kinase 5 from rice ( ), which is also induced in response to stress [ ], and JNK-like MAP kinase KGB-1 from Caenorhabditis elegans [].
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Protein Domain
IPR008350
Name: Mitogen-activated protein (MAP) kinase, ERK3/4
Type: Family
Description: Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:Serine/threonine-protein kinasesTyrosine-protein kinasesDual specificity protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)Protein kinase function is evolutionarily conserved from Escherichia coli to human [ ]. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases [].MAP (Mitogen Activated Protein) kinases participate in kinase cascades,whereby at least 3 protein kinases act in series, culminating in activation of MAP kinase []. MAP kinases are activated by dual phosphorylationon both tyrosine and threonine residues of a conserved TXY motif. ERKs (Extracellularly Regulated Kinases) belong to the family of MAPkinases. ERK 3 (also known as MAPK6) and ERK 4 (also known as MAPK4), however, have no more similarity to ERK 1 and 2 thando the other major classes of MAP kinase, JNK and p38. ERK3 is constitutively located in the nucleus, despite the lack of a traditionalnuclear localisation signal [ ]. It is unique among MAP kinases incontaining in its activation loop only a single phosphorylation site (serine 189) - other MAP kinases have the sequence TXY in this loop, but ERK3contains SEG, with glycine in place of tyrosine. ERK3 has no homologues in nematode or yeast genomes, indicating that it may have arisen from a relatively late gene duplication. Its structure,based on similarity to ERK2, contains segregated alpha and beta regions.
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Protein Domain
IPR023971
Name: Conserved hypothetical protein CHP04081, GSU1558
Type: Family
Description: Members of this protein family are small peptides found in the vicinity of a peptide modification-type radical SAM protein family. Multiple members of this protein family occur in species with a selenocysteine incorporation systems and have a TGA stop codon at position that aligns with cysteine residues from other homologues. This finding strongly suggests that GSU_1558 and similar members of the family are selenopeptides. The selenocysteine insertion sequence (SECIS) finder bSECISearch finds two homologous SECIS elements for two TGA codons in the extension of GSU_1558. Meanwhile, the pairing with the radical SAM enzyme suggests additional modification.
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Protein Domain
IPR021310
Name: Plant viral coat protein nucleocapsid
Type: Family
Description: This family of nucleocapsid proteins is from ssRNA negative-strand viruses of plant origin.
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Protein Domain
IPR023973
Name: Conserved hypothetical protein CHP04061, AZL007950
Type: Family
Description: This set of proteins includes PP_3335 from Pseudomonas putida and AZL_007950, a member of a putative biosynthetic cluster from Azospirillum sp. B510. The function of these proteins is unknown.
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Protein Domain
IPR021312
Name: Protein of unknown function DUF2889
Type: Family
Description: This bacterial family of proteins has no known function.
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Protein Domain
IPR021313
Name: Protein of unknown function DUF2909
Type: Family
Description: This is a family of proteins conserved in Proteobacteria of unknown function.
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Protein Domain
IPR021314
Name: Protein of unknown function DUF2911
Type: Family
Description: This bacterial family of proteins has no known function.
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Protein Domain
IPR021316
Name: Protein of unknown function DUF2913
Type: Family
Description: This family of proteins with unknown function appear to be restricted to Gammaproteobacteria.
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Protein Domain
IPR021317
Name: Protein of unknown function DUF2917
Type: Family
Description: This bacterial family of proteins appears to be restricted to Proteobacteria.
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Protein Domain
IPR021380
Name: Protein of unknown function DUF3013
Type: Family
Description: This bacterial family of proteins with unknown function appear to be restricted to Firmicutes.
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Protein Domain
IPR021381
Name: Protein of unknown function DUF3011
Type: Family
Description: Most proteins in this family are from bacteria. However, this entry also includes lectin ADEL from Aplysia dactylomela (Spotted sea hare). ADEL can agglutinate and inhibit biofilm formation of Staphylococcus aureus [ ].
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Protein Domain
IPR021382
Name: Protein of unknown function DUF3014
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Proteobacteria.
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Protein Domain
IPR021383
Name: Protein of unknown function DUF3015
Type: Family
Description: This bacterial family of proteins has no known function.
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Protein Domain
IPR021385
Name: Protein of unknown function DUF3017
Type: Family
Description: This bacterial family of proteins with unknown function appear to be restricted to Actinobacteria.
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Protein Domain
IPR021387
Name: Protein of unknown function DUF3023
Type: Family
Description: This bacterial family of proteins with unknown function appear to be restricted to Alphaproteobacteria.
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Protein Domain
IPR021389
Name: Protein of unknown function DUF3022
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Proteobacteria.
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Protein Domain
IPR021370
Name: Protein of unknown function DUF2987
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
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Protein Domain
IPR021372
Name: Protein of unknown function DUF2989
Type: Family
Description: Some members in this bacterial family of proteins are annotated as lipoproteins however this cannot be confirmed.
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Protein Domain
IPR021373
Name: Protein of unknown function DUF2993
Type: Family
Description: This entry represents a bacterial protein family that includes several uncharacterised proteins. Some members of this group are predicted to be phospholipid-binding proteins from the LmeA family. LmeA is critical for controlling the mannan chain length of lipomannan/lipoarabinomannan [ ].
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Protein Domain
IPR021375
Name: Protein of unknown function DUF2997
Type: Family
Description: This family of proteins has no known function.
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Protein Domain
IPR021376
Name: Protein of unknown function DUF2999
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
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Protein Domain
IPR021377
Name: Protein of unknown function DUF3006
Type: Family
Description: This family of proteins has no known function.
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Protein Domain
IPR021378
Name: Protein of unknown function DUF3010
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
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Protein Domain
IPR021379
Name: Protein of unknown function DUF3012
Type: Family
Description: This family of proteins with unknown function is restricted to Gammaproteobacteria.
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Protein Domain
IPR045335
Name: Cell division protein FtsQ, C-terminal
Type: Homologous_superfamily
Description: FtsQ is an essential cell division protein. It may link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic [ ]. FtsQ may control the correct divisome assembly []. FtsQ has a short N-terminal cytoplasmic domain and a larger C-terminal periplasmic domain []. This entry represents the C-terminal region of FtsQ.
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Protein Domain
IPR033341
Name: Spindle and kinetochore-associated protein 3
Type: Family
Description: The Ska complex is an essential mitotic component required for accurate cell division in human cells. It is an important kinetochore component involved in the formation of kinetochore-microtubule interactions, and together with the Ndc80 complex couples chromosome movement to microtubule depolymerization []. The complex is composed of three subunits: Ska1, Ska2, and Ska3.Ska3 was the last subunit of the complex identified [ ]. Ska3 accumulates on kinetochores in prometaphase after nuclear envelope breakdown. During mitosis, it is required for the maintenance of chromosome cohesion and may play an important role in silencing the spindle checkpoint [].
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Protein Domain
IPR021361
Name: Protein of unknown function DUF2829
Type: Family
Description: This is a uncharacterised family of proteins found in bacteria and bacteriphages.
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Protein Domain
IPR021362
Name: Protein of unknown function DUF2834
Type: Family
Description: The function of DUF2834 is not clear.
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Protein Domain
IPR021363
Name: Protein of unknown function DUF2835
Type: Family
Description: This is a bacterial family of uncharacterised proteins. One member of this family ( ) is annotated as the A subunit of Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV).
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Protein Domain
IPR045327
Name: Protein of unknown function DUF5881
Type: Family
Description: This is a family of uncharacterised proteins predominantly found in viruses.
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Protein Domain
IPR021364
Name: Protein of unknown function DUF2857
Type: Family
Description: This is a bacterial family of uncharacterised proteins.
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Protein Domain
IPR021365
Name: Protein of unknown function DUF2891
Type: Family
Description: This is a bacterial family of uncharacterised proteins.
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Protein Domain
IPR021366
Name: Protein of unknown function DUF2981
Type: Family
Description: This eukaryotic family of proteins has no known function.
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Protein Domain
IPR021367
Name: Protein of unknown function DUF2982
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
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Protein Domain
IPR045320
Name: Zinc finger protein JAGGED/STAMENLESS 1-like
Type: Family
Description: This entry represents a group of plant zinc finger proteins, including JAGGED, JAGGED-like from Arabidopsis and STAMENLESS 1 from rice. JAGGED is a transcription factor activated in the emerging organ primordia and in the distal region of immature organs [ ]. It controls growth anisotropy and coordination between cell size and cell cycle during plant organogenesis []. JAGGED-like acts redundantly with JAGGED to define stamen and carpel shape []. STAMENLESS 1 regulates floral organ identity and cell proliferation in the inner floral whorls. It may specify the identities of lodicule and stamen through positive regulation of MADS16 expression. May contribute to morphogenesis by suppressing OSH1 expression in the lateral organs [].
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