Search our database by keyword

- or -

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, pathways, authors, ontology terms, etc. (e.g. eve, embryo, zen, allele)
  • Use OR to search for either of two terms (e.g. fly OR drosophila) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. dros* for partial matches or fly AND NOT embryo to exclude a term

Search results 8901 to 9000 out of 30763 for seed protein

Category restricted to ProteinDomain (x)

<< First    < Previous  |  Next >    Last >>
0.026s

Categories

Category: ProteinDomain
« show all
Type Details Score
Protein Domain
IPR031666
Name: Protein of unknown function DUF5084
Type: Family
Description: This protein is believed to be involved in the type VII secretion system.
•
•
•
•
•
Protein Domain
IPR018686
Name: Protein of unknown function DUF2175
Type: Family
Description: This family of various hypothetical archaeal proteins has no known function.
•
•
•
•
•
Protein Domain
IPR031664
Name: Protein of unknown function DUF5085
Type: Family
Description: This protein is believed to be involved in the type VII secretion system.
•
•
•
•
•
Protein Domain
IPR028001
Name: Protein of unknown function DUF4601
Type: Family
Description: This protein family is found in eukaryotes. In humans, the gene encoding this protein is found in chromosome 19, open reading frame 45.
•
•
•
•
•
Protein Domain
IPR028008
Name: Protein of unknown function DUF4441
Type: Family
Description: This family is largely made up of uncharacterised proteins from the Ciliophora. The function is not known.
•
•
•
•
•
Protein Domain
IPR028004
Name: Protein of unknown function DUF4643
Type: Family
Description: This family of proteins is found in eukaryotes. Proteins in this family are typically between 254 and 462 amino acids in length.
•
•
•
•
•
Protein Domain
IPR028006
Name: Protein of unknown function DUF4570
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in eukaryotes.
•
•
•
•
•
Protein Domain
IPR018695
Name: Protein of unknown function DUF2194
Type: Family
Description: This family of prokaryotic proteins has no known function; however it may be a membrane protein.
•
•
•
•
•
Protein Domain
IPR018696
Name: Protein of unknown function DUF2195
Type: Family
Description: This family of various bacterial proteins has no known function.
•
•
•
•
•
Protein Domain
IPR018693
Name: Protein of unknown function DUF2192
Type: Family
Description: This family of various hypothetical archaeal proteins has no known function.
•
•
•
•
•
Protein Domain
IPR018694
Name: Protein of unknown function DUF2193
Type: Family
Description: This family of various hypothetical archaeal proteins has no known function
•
•
•
•
•
Protein Domain
IPR018691
Name: Protein of unknown function DUF2188
Type: Family
Description: DUF3892 is related to the truncated RNaseH fold-containing ribosome hibernation factors. It has been predicted to function as a possible conflict effector domain at the ribosome, based on comparable genome contextual associations with DUF2188, including repeated association with nucleotide-activated effector conflict systems [ ].
•
•
•
•
•
Protein Domain
IPR018692
Name: Predicted integral membrane protein DUF2189
Type: Family
Description: This family includes several hypothetical prokaryotic proteins. Some are described as putative cytochrome c oxidases.
•
•
•
•
•
Protein Domain
IPR018690
Name: Protein of unknown function DUF2187
Type: Family
Description: This family consists of various hypothetical bacterial proteins with unknown function. It includes the uncharacterised YkvS protein from Bacillus subtilis.
•
•
•
•
•
Protein Domain
IPR031657
Name: Replication protein A, OB domain
Type: Domain
Description: Replication protein A contains two OB domains in it's DNA binding region. This is the second of the OB domains [ ].
•
•
•
•
•
Protein Domain
IPR018699
Name: Protein of unknown function DUF2203
Type: Family
Description: This family has no known function.
•
•
•
•
•
Protein Domain
IPR018697
Name: Protein of unknown function DUF2199
Type: Family
Description: This domain has no known function.
•
•
•
•
•
Protein Domain
IPR045042
Name: Mechanosensitive ion channel protein YnaI-like
Type: Family
Description: This entry represents a group of mechanosensitive channel proteins from bacteria and plants, including YnaI from E. coli and MSL2/3 from Arabidopsis. YnaI has been shown to protect cells against hypoosmotic stress when highly overexpressed [ ]. MSL2/3 are chloroplastic proteins that regulate chloroplast size and FtsZ ring formation [].
•
•
•
•
•
Protein Domain
IPR018662
Name: Protein of unknown function DUF2095
Type: Family
Description: This domain, found in various hypothetical prokaryotic proteins, has no known function.
•
•
•
•
•
Protein Domain
IPR018661
Name: Protein of unknown function DUF2093
Type: Family
Description: This family of various hypothetical prokaryotic proteins has no known function.
•
•
•
•
•
Protein Domain
IPR018666
Name: Protein of unknown function DUF2125
Type: Family
Description: This family of conserved hypothetical proteins has no known function.
•
•
•
•
•
Protein Domain
IPR003935
Name: Lens fibre membrane intrinsic protein
Type: Family
Description: The epithelial membrane proteins (EMP-1, -2 and -3), peripheral myelin protein 22 (PMP22), and lens fibre membrane intrinsic protein (LMIP) comprise a protein family on the basis of sequence and structural similarities [ ]. Each family member is a small hydrophobic membrane glycoprotein, ~160-170 amino acids in length, and shares a common predicted transmembrane (TM) topology of 4 TM domains, with intracellular N- and C-termini [].LMIP, previously termed MP17, MP18, MP19 and MP20, is expressed at extremely high levels in the mammalian eye lens, where it is localised to the thicker (16-17nm) cell membrane junctions [ ]. Although its function has not been elucidated, it has been shown to co-localise with connexin-46, suggesting that it may be involved in the organisation of junctional plaques []. A role for LMIP in signal transduction has also been proposed, as it is phosphorylated by cAMP-dependent kinase and binds calmodulin [].
•
•
•
•
•
Protein Domain
IPR043612
Name: Non-structural protein NSP4, N-terminal, coronavirus
Type: Domain
Description: Nonstructural protein 4 (NSP4/nsp4) is encoded by ORF1a/1ab and proteolytically released from the pp1a/1ab polyprotein in coronaviruses (CoVs). It is a membrane-spanning protein which is thought to anchor the viral replication-transcription complex (RTC) to modified endoplasmic reticulum membranes which forms double-membrane vesicles (DMVs) or convoluted membranes (CMs). NSP4 is required for RTC formation [ , ].This is the N-terminal domain of the coronavirus NSP4 which represents the membrane spanning region, covering four transmembrane regions [ ].
•
•
•
•
•
Protein Domain
IPR018673
Name: Protein of unknown function DUF2141
Type: Family
Description: This family of conserved hypothetical proteins has no known function.
•
•
•
•
•
Protein Domain
IPR018671
Name: Protein of unknown function DUF2138
Type: Family
Description: This entry contains uncharacterised proteins found in Proteobacteria, including Uncharacterized protein YfaA from Escherichia coli (strain K12).
•
•
•
•
•
Protein Domain
IPR018672
Name: Protein of unknown function DUF2140
Type: Family
Description: This protein family contains uncharacterised proteins found in Firmicutes, including Uncharacterized protein YpmS from Bacillus subtilis (strain 168).
•
•
•
•
•
Protein Domain
IPR031634
Name: Protein kinase G, rubredoxin domain
Type: Domain
Description: This rubredoxin domain is found in the N-terminal of protein kinase G, and is essential for kinase activity [ ].
•
•
•
•
•
Protein Domain
IPR018676
Name: Protein of unknown function DUF2149
Type: Family
Description: This entry represents a group of uncharacterised proteins from bacteria and archaea.
•
•
•
•
•
Protein Domain
IPR041240
Name: Protein of unknown function DUF5541
Type: Family
Description: This is a family of unknown function found in primates.
•
•
•
•
•
Protein Domain
IPR043899
Name: Protein of unknown function DUF5789
Type: Family
Description: This is a family of proteins of unknown function predominantly found in Halobacteria.
•
•
•
•
•
Protein Domain
IPR043897
Name: Protein of unknown function DUF5835
Type: Family
Description: This entry represents a family of uncharacterised proteins of unknown function found in Lactobacillus salivarius. It is associated with the biosynthetic gene cluster for the bacteriocin salivaricin CRL 1328, which is similar to the gene cluster for the bacteriocin ABP118 [ ].
•
•
•
•
•
Protein Domain
IPR041236
Name: Primosomal protein N, C-terminal domain
Type: Domain
Description: This is the C-terminal domain found in PriA DNA helicase, a multifunctional enzyme that mediates the process of restarting prematurely terminated DNA replication reactions in bacteria. The C-terminal domain (CTD) bears similarity to the S10 subunit which binds branched rRNA within the bacterial ribosome. The C-terminal domain is part of the helicase domain of PriA proteins. It acts together with the 3' DNA-binding domain to form a site for binding ssDNA-binding protein (SSB) [ ].
•
•
•
•
•
Protein Domain
IPR043895
Name: Protein of unknown function DUF5839
Type: Family
Description: This entry represents a family of uncharacterised proteins of unknown function associated with the biosynthetic gene cluster for glycocin F. The family appears to be restricted to Firmicutes.
•
•
•
•
•
Protein Domain
IPR043892
Name: Protein of unknown function DUF5841
Type: Family
Description: This is a family of proteins of unknown function from Enterococcus associated with the biosynthetic gene cluster for enterocin A.
•
•
•
•
•
Protein Domain
IPR041287
Name: Protein of unknown function DUF5548
Type: Family
Description: This is a family of unknown function found in primates.
•
•
•
•
•
Protein Domain
IPR006902
Name: Umbravirus long distance movement protein
Type: Family
Description: The long distance movement protein of Umbraviruses mediates the movement of viral RNA through the phloem of infected plants [ ].
•
•
•
•
•
Protein Domain
IPR018924
Name: Protein of unknown function DUF2486
Type: Family
Description: This family is made up of members from various Burkholderia spp. The function is unknown.
•
•
•
•
•
Protein Domain
IPR018920
Name: ESAT-6 secretion machinery protein EssA/YueC
Type: Family
Description: Mycobacterium tuberculosis secretes ESAT-6, a virulence factor belonging to the WXG100 family. Other Gram-positive human pathogens belonging to the phylum Firmicutes, e.g. Staphylococcus aureus, also secrete immune potent WXG100 proteins. S. aureus secretes ESAT-6-like proteins EsxA and EsxB. In S.aureus the WXG100 protein secretion system seems to be encoded by a locus of eight ORFs, called ess (eSAT-6 secretion system) [ ]. This locus encodes, amongst several other proteins, EssA, a protein predicted to possess one transmembrane domain. Due to its predicted membrane location and its absolute requirement for WXG100 protein secretion, it has been speculated that EssA could form a secretion apparatus. Proteins homologous to EssA are absent from mycobacteria []. The WXG100 secretion system has also been called the type VII secretion system, though this nomenlature is disputed [ ].Bacillus subtilis secretes the WXG100 virulence factor homologue YukE. YeuC has been shown to be required for YukE export within a nonessential Esat-6 protein secretion system (ESX or Ess) in B. subtilis. It is suggested to be part of the yuk/yue locus encoding the proteins involved in this ESX [ , ].
•
•
•
•
•
Protein Domain
IPR020212
Name: ESX secretion system protein YueC
Type: Family
Description: Bacillus subtilis secretes the WXG100 virulence factor homologue YukE. YeuC has been shown to be required for YukE export within a nonessential Esat-6 protein secretion system (ESX or Ess) in B. subtilis. It is suggested to be part of the yuk/yue locus encoding the proteins involved in this ESX [ , ].
•
•
•
•
•
Protein Domain
IPR034026
Name: ESAT-6 secretion machinery protein EssA
Type: Family
Description: Mycobacterium tuberculosis secretes ESAT-6, a virulence factor belonging to the WXG100 family. Other Gram-positive human pathogens belonging to the phylum Firmicutes, e.g. Staphylococcus aureus, also secrete immune potent WXG100 proteins. S. aureus secretes ESAT-6-like proteins EsxA and EsxB. In S.aureus the WXG100 protein secretion system seems to be encoded by a locus of eight ORFs, called ess (eSAT-6 secretion system) [ ]. This locus encodes, amongst several other proteins, EssA, a protein predicted to possess one transmembrane domain. Due to its predicted membrane location and its absolute requirement for WXG100 protein secretion, it has been speculated that EssA could form a secretion apparatus. Proteins homologous to EssA are absent from mycobacteria []. The WXG100 secretion system has also been called the type VII secretion system, though this nomenlature is disputed [ ].
•
•
•
•
•
Protein Domain
IPR006951
Name: Protein of unknown function DUF643
Type: Family
Description: These are proteins of unknown function found in Borrelia burgdorferi (Lyme disease spirochete)
•
•
•
•
•
Protein Domain
IPR006959
Name: Protein of unknown function DUF645
Type: Family
Description: This family contains uncharacterised proteins from Vibrio cholerae.
•
•
•
•
•
Protein Domain
IPR018918
Name: Protein of unknown function DUF2483
Type: Family
Description: This is a family of unknown function is found in tailed bacteriophages and suspected prophages found in Firmicutes.
•
•
•
•
•
Protein Domain
IPR018919
Name: Protein of unknown function DUF2484
Type: Family
Description: A role of this family in UDP-N-acetylenolpyruvoylglucosamine reductase, as MurB, could not be confirmed.
•
•
•
•
•
Protein Domain
IPR018916
Name: Protein of unknown function DUF2481
Type: Family
Description: This is a hypothetical protein family homologous to Lmo2305 in Bacteriophage A118 systems.
•
•
•
•
•
Protein Domain
IPR018917
Name: Protein of unknown function DUF2482
Type: Family
Description: This entry represents a group of phage proteins with unknown function.
•
•
•
•
•
Protein Domain
IPR018914
Name: Protein of unknown function DUF2480
Type: Family
Description: All the members of this family are uncharacterised proteins, but the environment in which they are found on the bacterial genome suggests a function as a glucose-6-phosphate isomerase ( ). This could not, however, be confirmed.
•
•
•
•
•
Protein Domain
IPR006938
Name: Protein of unknown function DUF624
Type: Family
Description: This family consists of uncharacterised or hypothetical bacterial proteins.
•
•
•
•
•
Protein Domain
IPR018912
Name: Protein of unknown function DUF2478
Type: Family
Description: This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
•
•
•
•
•
Protein Domain
IPR043929
Name: Protein of unknown function DUF5755
Type: Family
Description: This entry represents a family of uncharacterised proteins mainly found in Mimiviridae and Phycodnaviridae.
•
•
•
•
•
Protein Domain
IPR043927
Name: Protein of unknown function DUF5778
Type: Family
Description: DUF5778 proteins are predominantly found in Halobacteria.
•
•
•
•
•
Protein Domain
IPR043923
Name: Protein of unknown function DUF5774
Type: Family
Description: This is a groupof uncharacterised proteins found in Pimascovirales.
•
•
•
•
•
Protein Domain
IPR043924
Name: Protein of unknown function DUF5775
Type: Family
Description: This is a family of uncharacterised proteins mostly found in phycodnaviruses. These proteins contain a predicted N-terminal transmembrane helix.
•
•
•
•
•
Protein Domain
IPR043921
Name: Protein of unknown function DUF5772
Type: Family
Description: The function of DUF5772 is not clear.
•
•
•
•
•
Protein Domain
IPR043922
Name: Protein of unknown function DUF5773
Type: Family
Description: This is a family of uncharacterised proteins found in Phycodnaviridae.
•
•
•
•
•
Protein Domain
IPR043920
Name: Protein of unknown function DUF5757
Type: Family
Description: This is a family of uncharacterised proteins found in viruses. This entry includes virion structural protein ORF43 from Trichoplusia ni ascovirus 2c, ORF84 from Spodoptera frugiperda ascovirus 1a and ORF146 from Heliothis virescens ascovirus 3e. ORF43 has 32% amino acid identity to the predicted dynein-like beta-chain protein in SfAV-1a (ORF84) and HvAV-3e (ORF146) [ ].
•
•
•
•
•
Protein Domain
IPR004321
Name: V-D-J recombination activating protein 2
Type: Family
Description: The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination. V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule.V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates ablunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletionbefore formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein.In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferredfrom the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end"complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in astable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).
•
•
•
•
•
Protein Domain
IPR031945
Name: Protein of unknown function DUF4775
Type: Family
Description: This family of insect proteins is functionally uncharacterised. Proteins in this family are typically between 308 and 484 amino acids in length.
•
•
•
•
•
Protein Domain
IPR043918
Name: Protein of unknown function DUF5760
Type: Family
Description: The function of DUF5760 is not clear.
•
•
•
•
•
Protein Domain
IPR043919
Name: Protein of unknown function DUF5758
Type: Family
Description: This is a family of uncharacterised proteins found in viruses and bacteria. Some members contain the pentapeptide repeat.
•
•
•
•
•
Protein Domain
IPR043916
Name: Protein of unknown function DUF5761
Type: Family
Description: The function of DUF5761 is not clear.
•
•
•
•
•
Protein Domain
IPR043914
Name: Protein of unknown function DUF5763
Type: Family
Description: The function of DUF5763 is not clear.
•
•
•
•
•
Protein Domain
IPR043915
Name: Protein of unknown function DUF5762
Type: Family
Description: The function of this family is not clear. Some members may be transmembrane proteins.
•
•
•
•
•
Protein Domain
IPR043912
Name: Protein of unknown function DUF5765
Type: Family
Description: The function of DUF5765 is not clear.
•
•
•
•
•
Protein Domain
IPR043913
Name: Protein of unknown function DUF5764
Type: Family
Description: The function of DUF5764 is not clear.
•
•
•
•
•
Protein Domain
IPR004335
Name: Protein of unknown function DUF244
Type: Family
Description: Many of the proteins in this entry are Borrelia burgdorferi plasmid proteins of unknown function.
•
•
•
•
•
Protein Domain
IPR043910
Name: Protein of unknown function DUF5767
Type: Family
Description: The function of DUF5767 is not clear.
•
•
•
•
•
Protein Domain
IPR043911
Name: Protein of unknown function DUF5766
Type: Family
Description: This is a family of uncharacterised proteins found in Pimascovirales.
•
•
•
•
•
Protein Domain
IPR031938
Name: Protein inscuteable homologue, LGN-binding domain
Type: Domain
Description: This is the LGN-binding domain (LBD) of the inscuteable homologue protein. It interacts with the TPR motifs of G-protein-signaling modulator 2 (GPSM2, also known as LGN) and stabilises LGN [ ].
•
•
•
•
•
Protein Domain
IPR031934
Name: Protein of unknown function DUF4769
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in insects. Proteins in this family are typically between 291 and 501 amino acids in length.
•
•
•
•
•
Protein Domain
IPR034982
Name: Iron-regulated protein A, imelysin-like domain
Type: Domain
Description: Putative iron-regulated protein A (IrpA), found mainly in Bacteriodes, proteobacteria and cyanobacteria, contains a domain similar to insulin-cleaving membrane protease (imelysin, ICMP) protein [ ]. IrpA has been shown to be essential for growth under iron-deficient conditions in the cyanobacteria Synechococcus sp []. The conserved GxHxxE motif is similar to other known imelysin-like proteins that are regulated by iron, such as ICMP and EfeO.
•
•
•
•
•
Protein Domain
IPR031932
Name: Arterivirus nonstructural protein 7 alpha
Type: Family
Description: Translation of the arterivirus genome results in two large precursor polyproteins, pp1a and the C-terminally extended frameshift product pp1ab. These proteins are cleaved by up to four virus-encoded proteases to yield at least 13 nonstructural proteins (nsps) (nsp1 to nsp12, including nsp7) plus a substantial number of processing intermediates of unknown function. Nsp7 can be internally cleaved by the nsp4 protease, yielding small amounts of nsp7alpha and nsp7beta. This entry represents nsp7alpha, which is likely to have a role in viral RNA synthesis [ ].
•
•
•
•
•
Protein Domain
IPR031931
Name: Protein of unknown function DUF4768
Type: Family
Description: This family of proteins from Drosophila is functionally uncharacterised. Proteins are typically between 116 and 180 amino acids in length. There is a conserved FFFGQY sequence motif.
•
•
•
•
•
Protein Domain
IPR043909
Name: Protein of unknown function DUF5768
Type: Family
Description: This is a family of uncharacterised proteins found in Pandoravirus.
•
•
•
•
•
Protein Domain
IPR043907
Name: Protein of unknown function DUF5770
Type: Family
Description: This is a family of uncharacterised proteins found in Iridoviridae, including uncharacterized protein 045L from frog virus 3.
•
•
•
•
•
Protein Domain
IPR043908
Name: Protein of unknown function DUF5769
Type: Family
Description: This is a family of uncharacterised proteins found in Mimiviridae.
•
•
•
•
•
Protein Domain
IPR043905
Name: Protein of unknown function DUF5771
Type: Family
Description: This is a family of uncharacterised proteins. Some members contain the GNAT domain and may have N-acetyltransferase activity.
•
•
•
•
•
Protein Domain
IPR043903
Name: Protein of unknown function DUF5785
Type: Family
Description: This is a family of proteins of unknown function predominantly found in Halobacteria.
•
•
•
•
•
Protein Domain
IPR043901
Name: Protein of unknown function DUF5787
Type: Family
Description: This is a family of proteins of unknown function predominantly found in Halobacteria.
•
•
•
•
•
Protein Domain
IPR043900
Name: Protein of unknown function DUF5788
Type: Family
Description: This is a family of uncharacterised proteins of unknown function found in Halobacteria and Methanomicrobia.
•
•
•
•
•
Protein Domain
IPR031926
Name: Transmembrane protein 135, N-terminal domain
Type: Domain
Description: This domain is found in putative peroxisomal membrane proteins from eukaryotes. It represents the highly conserved N-terminal region that has several highly conserved cysteine residues.
•
•
•
•
•
Protein Domain
IPR006974
Name: Protein of unknown function DUF648
Type: Family
Description: This is a family of hypothetical proteins from Chlamydia pneumoniae.
•
•
•
•
•
Protein Domain
IPR043961
Name: Protein of unknown function DUF5749
Type: Family
Description: The function of this family of euryarchaeal proteins is unknown. The structure of this protein forms a beta barrel.
•
•
•
•
•
Protein Domain
IPR043962
Name: Protein of unknown function DUF5750
Type: Family
Description: The function of this family of proteins is unknown.
•
•
•
•
•
Protein Domain
IPR043960
Name: Protein of unknown function DUF5748
Type: Family
Description: The function of this family of euryarchaeal proteins is unknown.
•
•
•
•
•
Protein Domain
IPR031985
Name: Protein of unknown function DUF4787
Type: Family
Description: This presumed protein family is functionally uncharacterised. It is found in eukaryotes, and is approximately 70 amino acids in length.
•
•
•
•
•
Protein Domain
IPR031983
Name: Protein of unknown function DUF4786
Type: Family
Description: This family of proteins is functionally uncharacterised. Proteins in this family are typically between 209 and 353 amino acids in length.
•
•
•
•
•
Protein Domain
IPR004377
Name: ABC transporter, permease protein DrrB/DrrC
Type: Family
Description: DrrB and DrrC are part of the ABC transporter complex drrABC involved in doxorubicin and daunorubicin resistance [ ]. The members of this family are found mainly in mycobacteria. They are paralogous to proteins of the resistance efflux system of Streptomyces peucetius []. In mycobacteria this pump confers resistance towards a broad range of structurally unrelated antibiotics [].
•
•
•
•
•
Protein Domain
IPR043952
Name: Protein of unknown function DUF5783
Type: Family
Description: Proteins in this entry are predominantly found in Halobacteria.
•
•
•
•
•
Protein Domain
IPR043953
Name: Protein of unknown function DUF5784
Type: Family
Description: Proteins in this entry are predominantly found in Halobacteria.
•
•
•
•
•
Protein Domain
IPR004376
Name: Conserved hypothetical protein CHP00024, phosphoesterase-like
Type: Family
Description: Members of this uncharacterised family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of Escherichia coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
•
•
•
•
•
Protein Domain
IPR031979
Name: Protein of unknown function DUF4785
Type: Family
Description: This family of proteins is found in bacteria. Proteins in this family are typically between 392 and 442 amino acids in length.
•
•
•
•
•
Protein Domain
IPR031978
Name: Protein of unknown function DUF4784
Type: Family
Description: This is a family of uncharacterised proteins from Bacteroidetes.
•
•
•
•
•
Protein Domain
IPR031977
Name: Protein of unknown function DUF4783
Type: Family
Description: This family of proteins is found in bacteria. Proteins in this family are approximately 130 amino acids in length. There is a single completely conserved residue F that may be functionally important.
•
•
•
•
•
Protein Domain
IPR031974
Name: Programmed cell death protein 7
Type: Family
Description: Programmed cell death protein 7 (PDCD7, ES18) may be involved in specific apoptotic processes [ ]. This entry also includes Arabodopsis At2g46200 protein, which is predicted to be U11/U12 small nuclear ribonucleoprotein [ ].
•
•
•
•
•
Protein Domain
IPR043940
Name: Protein of unknown function DUF5781
Type: Family
Description: Proteins in this entry are predominantly found in Halobacteria.
•
•
•
•
•
Protein Domain
IPR018987
Name: Protein of unknown function DUF1999
Type: Family
Description: This family contains a putative Fe-S binding reductase ( ) whose structure adopts an alpha and beta fold.
•
•
•
•
•
Protein Domain
IPR043930
Name: Protein of unknown function DUF5754
Type: Family
Description: The function of DUF5754 is not clear.
•
•
•
•
•
Protein Domain
IPR043931
Name: Protein of unknown function DUF5779
Type: Family
Description: DUF5779 proteins are predominantly found in Halobacteria.
•
•
•
•
•
Protein Domain
IPR031959
Name: Protein of unknown function DUF4779
Type: Family
Description: This family of insect proteins is functionally uncharacterised.
•
•
•
•
•
USDA
InterMine logo
The Legume Information System (LIS) is a research project of the USDA-ARS:Corn Insects and Crop Genetics Research in Ames, IA.
LegumeMine || ArachisMine | CicerMine | GlycineMine | LensMine | LupinusMine | PhaseolusMine | VignaMine | MedicagoMine
InterMine © 2002 - 2022 Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, United Kingdom