LIS Datastore: species descriptions
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Arachis duranensis organism and strain information.
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Arachis hypogaea organism and strain information.
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Arachis ipaensis organism and strain information.
LIS Datastore: genome assemblies
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Genome assembly 1 for Arachis ipaensis, accession K30076.
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Genome assembly 1 for Arachis hypogaea, cultivar Tifrunner
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Genome assembly 2 for Arachis hypogaea, cultivar Tifrunner. This version has structural changes relative to assembly 1.
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Genome assembly 1 for Arachis duranensis, accession V14167
LIS Datastore: genome annotation
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genome annotations for Arachis ipaensis K30076.gnm1.ann1
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Arachis hypogaea accession Tifrunner annotation files from genome assembly 1.0
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Gene models for genome assembly 2 for Arachis hypogaea, cultivar Tifrunner.
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genome annotations
LIS Datastore: genetic studies
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A genetic map from a Huayu28 x P76 RIL population composed of 2,334 markers (2,266 SNPs and 68 microsatellites) for the study of seed oleic and linoleic acid content
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SSR genetic map generated from a RIL mapping population derived from the cross of ICGS 44 and ICGS 76
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SSR genetic map generated from a RIL population derived from the cross of ICGS 76 with CSMG 84-1
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Gangurde, Wang, et al. (2020) GWAS study of pod and seed weight on the NAM Florida-7 mapping population
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Gangurde, Wang, et al. (2020) NAM Tifrunner GWAS study of pod and seed weight
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SSR-based genetic map constructed using a F5:6 RIL population derived from the cross of SunOleic 97R with NC94022 along with a Tomato spotted wilt virus QTL
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An F6 population of 266 RILs was advanced by single seed descent from a cross of TAG 24 and GPBD 4. QTLs were found for Late leaf spot and Puccinia rust.
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SSR genetic map from a cross of 'TAG 24' and 'ICGV 86031'
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TT_TG26_x_GPBD4_b, an SSR map created from a cross of the A. hypogaea cultivars 'TG 26' and 'GPBD 4'.
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Genetic map derived from a cross of A. hypogaea cultivers 'TG 26' and 'GPBD 4'.
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Genetic map of Tifrunner x GT-C20 for the study of early and late leaf spots (ELS and LLS) and tomato spotted wilt virus (TSWV).
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SSR-based genetic map constructed using a F5:6 RIL population derived from Tifrunner x GT-C20
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TT_Tifrunner_x_GT-C20_b, an SSR-based map derived from a cross of the A. hypogaea cultivars Tifrunner and GT-C20.
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GWAS determining markers associated with fatty acid composition in the USDA peanut core collection.
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Genetic map derived from a cross of A. hypogaea cultivars VG 9514 and TAG 24.
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Consensus genetic map for Arachis hypogaea from three RIL populations: ICGS76 x CSMG84-1, ICGS44 x ICGS76, and TAG24 x ICGV86031
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A consensus genetic map for Arachis hypogaea built from TAG24 x GPBD4 and TG26 x GPBD4 RIL populations
LIS Datastore: genetic maps
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A genetic map from a Huayu28 x P76 RIL population composed of 2,334 markers (2,266 SNPs and 68 microsatellites) for the study of seed oleic and linoleic acid content.
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SSR genetic map generated from a RIL mapping population derived from the cross of ICGS 44 and ICGS 76
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SSR genetic map generated from a RIL population derived from the cross of ICGS 76 with CSMG 84-1
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SSR-based genetic map constructed using a F5:6 RIL population derived from the cross of SunOleic 97R with NC94022 along with a Tomato spotted wilt virus QTL
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An F6 population of 266 RILs was advanced by single seed descent from a cross of TAG 24 and GPBD 4. QTLs were found for Late leaf spot and Puccinia rust.
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SSR genetic map from a cross of 'TAG 24' and 'ICGV 86031'
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TT_TG26_x_GPBD4_b, an SSR map created from a cross of the A. hypogaea cultivars 'TG 26' and 'GPBD 4'.
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Genetic map derived from a cross of A. hypogaea cultivers 'TG 26' and 'GPBD 4'.
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Genetic map of Tifrunner x GT-C20 for the study of early and late leaf spots (ELS and LLS) and tomato spotted wilt virus (TSWV).
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SSR-based genetic map constructed using a F5:6 RIL population derived from Tifrunner x GT-C20
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TT_Tifrunner_x_GT-C20_b, an SSR-based map derived from a cross of the A. hypogaea cultivars Tifrunner and GT-C20.
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Genetic map derived from a cross of A. hypogaea cultivars VG 9514 and TAG 24.
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Consensus genetic map for Arachis hypogaea from three RIL populations: ICGS76 x CSMG84-1, ICGS44 x ICGS76, and TAG24 x ICGV86031
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A consensus genetic map for Arachis hypogaea built from TAG24 x GPBD4 and TG26 x GPBD4 RIL populations
LIS Datastore: genetic markers
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Genetic map of Tifrunner x GT-C20 for the study of early and late leaf spots (ELS and LLS) and tomato spotted wilt virus (TSWV).
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Axiom_Arachis2 is a SNP marker set developed by Clevenger, et al. DOI:10.1016/j.molp.2016.11.015
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Axiom_Arachis_58K is a high-density SNP array with 58,233 SNPs reduced from 163,782 SNPs derived from DNA resequencing and RNA-sequencing of 41 groundnut accessions and wild diploid ancestors.
LIS Datastore: synteny
InterMine post-processor
