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Search results 6201 to 6300 out of 30763 for seed protein

Category restricted to ProteinDomain (x)

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Categories

Category: ProteinDomain
Type Details Score
Protein Domain
Name: Protein of unknown function DUF6322
Type: Family
Description: This family of proteins, predominantly found in Caudovirales, is functionally uncharacterised. Proteins in this family are approximately 150 amino acids in length. There are conserved sequences: ETINSMDYNTGY at the N-terminal, WTG in the centre and TDTTS at the C-terminal.
Protein Domain
Name: Protein of unknown function DUF6320
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is mainly found in Firmicute bacteria.
Protein Domain
Name: Protein of unknown function DUF6319
Type: Family
Description: This family of proteins found in bacteria is functionally uncharacterised.
Protein Domain
Name: Protein of unknown function DUF6313
Type: Family
Description: This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0000703) is described by MIBiG as an example of the following biosynthetic class, saccharide, in particular the kanamycin biosynthetic gene cluster from Streptomyces kanamyceticus [ ].
Protein Domain
Name: Protein serine/threonine phosphatase 2C, C-terminal
Type: Domain
Description: Protein phosphatase 2C (PP2C, also known as Protein phosphatase 1) is involved in regulating cellular responses to stress in various eukaryotes. It consists of two domains: an N-terminal catalytic domain and a C-terminal domain characteristic of mammalian PP2Cs. This domain consists of three antiparallel alpha helices, one of which packs against two corresponding α-helices of the N-terminal domain. The C-terminal domain does not seem to play a role in catalysis, but it may provide protein substrate specificity due to the cleft that is created between it and the catalytic domain [ ].
Protein Domain
Name: Protein of unknown function DUF3294
Type: Family
Description: This family was annotated as mitochondrial ribosomal protein Mrp8, based on the presumed similarity of the S.cerevisiae protein to an E.coli mitochondrial ribosomal protein. However, this similarity is spurious, and the function is not known.
Protein Domain
Name: Protein of unknown function DUF1153
Type: Family
Description: This family consists of several short, hypothetical bacterial proteins of unknown function.
Protein Domain
Name: Protein of unknown function DUF1149
Type: Family
Description: This entry consists of several hypothetical bacterial proteins of unknown function.
Protein Domain
Name: Protein of unknown function DUF1150
Type: Family
Description: This entry consists of several hypothetical bacterial proteins of unknown function.
Protein Domain
Name: Proteobacterial sortase system peptidoglycan-associated protein
Type: Family
Description: A newly defined histidine kinase ( ) and response regulator ( ) gene pair occurs exclusively in Proteobacteria, mostly of marine origin, nearly all of which contain a subfamily 6 sortase ( ) and its single dedicated target protein ( ) adjacent to to the sortase. This protein family shows up in only in those species with the histidine kinase/response regulator gene pair, and often adjacent to that pair. It belongs to the OmpA protein family ( ). Its function is unknown. We assign the gene symbol pdsO, for Proteobacterial Dedicated Sortase system OmpA family protein.
Protein Domain
Name: Protein of unknown function DUF1110
Type: Family
Description: This entry contains proteins with no known function at present, found in the Poaceae (true grasses).
Protein Domain
Name: Signal peptidase complex-like protein DTM1
Type: Family
Description: DTM1 is an endoplasmic reticulum (ER) membrane protein present in cereals. It is thought to play important roles in the ER membrane during early tapetum development and also in meiocyte development [ ].
Protein Domain
Name: Protein of unknown function DUF1163
Type: Family
Description: This entry represents a group of hypothetical Arabidopsis thaliana proteins of unknown function.
Protein Domain
Name: Protein of unknown function DUF1091
Type: Family
Description: This entry contains a number of proteins from Drosophila melanogaster and other insects. Their function is unknown. Based on its distant similarity to and conserved pattern of cysteine residues it is possible that these domains are also lipid binding.
Protein Domain
Name: Protein of unknown function DUF1143
Type: Family
Description: This family consists of several hypothetical mammalian proteins (from mouse and human). The function of this family is unknown.
Protein Domain
Name: Cilia- and flagella-associated protein 107-like
Type: Family
Description: The function of Cilia- and flagella-associated protein 107 (CFAP107 or C1orf158) may be a microtubule inner protein (MIP) part of the dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating [ ].This entry also includes UPF0686 protein C11orf1 and its homologues, whose function is unknown.
Protein Domain
Name: Protein of unknown function DUF1145
Type: Family
Description: This entry consists of several hypothetical bacterial proteins of unknown function.
Protein Domain
Name: Protein of unknown function DUF1146
Type: Family
Description: Members of this protein family are small, typically about 80 residues in length, and are highly hydrophobic. The gene is found so far only in a subset of the firmicutes in association with genes of the ATP synthase F1 complex or NADH-quinone oxidoreductase. This family includes YwzB from Bacillus subtilis.
Protein Domain
Name: Protein of unknown function DUF1140
Type: Family
Description: This family consists of several short, hypothetical phage and bacterial proteins. The function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF1192
Type: Family
Description: This family consists of several short, hypothetical, bacterial proteins of around 60 residues in length. The function of this family is unknown.
Protein Domain
Name: Stage III sporulation protein AC
Type: Family
Description: This family consists of several bacterial stage III sporulation protein AC (SpoIIIAC) sequences. The exact function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF6696
Type: Domain
Description: This entry represents an uncharacterised domain that is found associated with PF01471, but also a range of lipase and glycosyl hydrolase enzyme domains This suggests this domain may be a regulatory domain.
Protein Domain
Name: Protein of unknown function DUF1187
Type: Family
Description: This family consists of several short, hypothetical bacterial proteins of around 62 residues in length. Members of this family are found in Escherichia coli and Salmonella typhi. The function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF1583_N
Type: Domain
Description: Most of these Rhodopirellula baltica hypothetical proteins also match .
Protein Domain
Name: Protein of unknown function DUF6695
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteroidetes. Proteins in this family are typically between 329 and 354 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF1189
Type: Family
Description: This family is predominantly composed of bacterial proteins. Their function is unknown, although one family member, , has been suggested to have a role in maltodextrin utilisation [ ].
Protein Domain
Name: Uncharacterised protein family Ycf55, algae
Type: Family
Description: This entry represents proteins annotated as Ycf55, which are encoded in the chloroplast genomes of algae. Other members are found in plants and in the cyanobacteria. The function is unknown, though there are two completely conserved residues (L and D) that may be functionally important. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Protein Domain
Name: Protein of unknown function DUF6694
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in proteobacteria. Proteins in this family are typically between 109 and 273 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6693
Type: Family
Description: This family of small integral membrane proteins is functionally uncharacterised. This family may be distantly related to . This family of proteins is predominantly found in proteobacteria. Proteins in this family are typically between 104 and 121 amino acids in length.
Protein Domain
Name: Respiratory growth induced protein 1
Type: Family
Description: This family of fungal proteins includes RGI1, standing for respiratory growth induced 1. RGI1 is involved in aerobic energetic metabolism [ ].
Protein Domain
Name: Protein of unknown function DUF6692
Type: Domain
Description: Proteins in this entry are functionally uncharacterised. This presumed domain is found in proteins from Alphaproteobacteria. Proteins in this family are typically between 161 and 194 amino acids in length. This family is related to and is therefore part of the ferritin superfamily.
Protein Domain
Name: Protein of unknown function DUF2645
Type: Family
Description: This entry represents a family of proteins predominantly found in Enterobacterales. Some members in the family are annotated as inner membrane protein YjeO and YgiZ. However no function is currently known.
Protein Domain
Name: Protein of unknown function DUF6691
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 137 and 165 amino acids in length. Proteins in this family are related to the thiosulfate transporter, but appear to be about half the length. This suggests that this family may operate as a dimer to make a functional transporter.
Protein Domain
Name: Protein of unknown function DUF6690
Type: Domain
Description: This presumed domain is functionally uncharacterised. This domain family is found in Planctomycete bacteria, and is approximately 170 amino acids in length.
Protein Domain
Name: Protein of unknown function, DUF2577
Type: Family
Description: This entry represents a family of proteins with no known function, including Phage-like element PBSX protein XkdR from Bacillus subtilis (strain 168).
Protein Domain
Name: Protein of unknown function DUF6689
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in gamma proteobacteria. Proteins in this family are typically between 273 and 287 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF2654
Type: Family
Description: This entry represents a family of viral proteins whose function is not known.
Protein Domain
Name: Protein of unknown function DUF6688
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 360 and 412 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF1137
Type: Family
Description: This family consists of several hypothetical proteins specific to Chlamydia species. The function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF6687
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 342 and 363 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6686
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 102 and 118 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6685
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 188 and 325 amino acids in length.
Protein Domain
Name: Citrus tristeza virus 6kDa protein
Type: Family
Description: This family consists of several Citrus tristeza virus (CTV) 6kDa, 51 residue long hydrophobic (P6) proteins. The function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF6684
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in archaea. Proteins in this family are typically between 77 and 127 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6683
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 228 and 260 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF2556
Type: Family
Description: This family of proteins with unknown function appears to be restricted to Enterobacteriaceae.
Protein Domain
Name: Protein of unknown function DUF6682
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 216 and 235 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF1198
Type: Family
Description: This family consists of several bacterial proteins of around 150 residues in length which are specific to Escherichia coli, Salmonella species and Yersinia pestis. The function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF2572
Type: Family
Description: This bacterial family of proteins has no known function.
Protein Domain
Name: Protein of unknown function DUF6681
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in firmicutes. Proteins in this family are typically between 258 and 288 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6679
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in cyanobacteria. Proteins in this family are approximately 100 amino acids in length. There is a conserved DQQRWIE sequence motif.
Protein Domain
Name: Protein of unknown function DUF6678
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 112 and 148 amino acids in length.
Protein Domain
Name: Protein Gp5, N-terminal OB-fold domain
Type: Domain
Description: This domain is found at the N terminus of the Gp5 baseplate protein of Bacteriophage T4. The baseplate is located at the end of the phage tail. Gp5 is a lysozyme essential for localised hydrolysis of bacterial cell wall, which is necessary for viral DNA injection [ ]. This domain binds to the Gp27 protein []. It has the common OB fold [].
Protein Domain
Name: Protein of unknown function DUF1120
Type: Family
Description: This family consists of several bacterial proteins, at least one of which is involved in enzyme induction following nitrogen deprivation. The exact function of this family is unknown
Protein Domain
Name: Protein of unknown function DUF1175
Type: Family
Description: This family consists of several hypothetical bacterial proteins of around 210 residues in length. The function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF1173
Type: Family
Description: This family contains a group of hypothetical bacterial proteins that contain three conserved cysteine residues towards the N-terminal. The function of these proteins is unknown.
Protein Domain
Name: Protein of unknown function DUF2563
Type: Family
Description: This entry represents a family of proteins with unknown function that are predominantly found in Mycobacterium.
Protein Domain
Name: Protein of unknown function DUF2570
Type: Family
Description: This is a family of proteins with unknown function.
Protein Domain
Name: Protein of unknown function DUF1133
Type: Family
Description: This family consists of a number of hypothetical proteins from Escherichia coli O157:H7 and Salmonella typhi. The function of this family is unknown.
Protein Domain
Name: Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ
Type: Family
Description: Members of this radical SAM protein family are HemZ, a protein involved in coproporphyrinogen III decarboxylation. Alternative names for this enzyme (EC ) include coproporphyrinogen dehydrogenase and oxygen-independent coproporphyrinogen III oxidase. The family is related to, but distinct from HemN, and in Bacillus subtilis was shown to be connected to peroxide stress and catalase formation [ ].
Protein Domain
Name: Protein of unknown function DUF1177
Type: Family
Description: This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF1178
Type: Family
Description: This family consists of several hypothetical bacterial proteins of around 150 residues in length. The function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF1179
Type: Family
Description: This family consists of several hypothetical Caenorhabditis elegans proteins of around 106 residues in length. The function of the family is unknown.
Protein Domain
Name: Protein of unknown function DUF1180
Type: Family
Description: This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Protein Domain
Name: Conserved hypothetical protein CHP03815, CpaE-like
Type: Family
Description: Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins [ ]. Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The entry describes a clade restricted to the Actinobacteria.
Protein Domain
Name: Protein of unknown function DUF1181
Type: Family
Description: This family consists of several hypothetical proteins of around 120 residues in length which are found specifically in Trypanosoma brucei. The function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF3530
Type: Family
Description: This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Protein Domain
Name: Enterobacter phage Enc34, ssDNA-binding protein
Type: Family
Description: This entry includes protein 50 from Bacteriophage APSE-1 and ssDNA-binding protein from Enterobacter phage Enc34 ( ), which shows a globular shape with a mixed α/β architecture consisting mainly of β-strands that clearly resembles the oligosaccharide/oligonucleotide-binding (OB)-fold [ ]. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Protein Domain
Name: Protein of unknown function DUF6713
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 117 and 141 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6712
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria and some viral sequences. Proteins in this family are typically between 270 and 340 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6711
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 115 and 155 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6710
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 220 and 300 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6709
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 340 and 435 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6707
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 190 and 350 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6706
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteroidetes. Proteins in this family are approximately 100 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6704
Type: Family
Description: This family of presumed integral membrane proteins is functionally uncharacterised. This family of proteins is found in actinobacteria. Proteins in this family are typically between 76 and 89 amino acids in length.
Protein Domain
Name: Outer envelope pore protein 21
Type: Family
Description: Oep21 has been identified in plants as an ATP-regulated anion-selective solute channel from the outer chloroplast membrane [ ]. Members of this family are also found in green algae.
Protein Domain
Name: Protein of unknown function DUF2639
Type: Family
Description: This family is conserved in the Bacillaceae family. Several members are named as being YflJ, but the function is not known.
Protein Domain
Name: Protein of unknown function DUF6703
Type: Family
Description: This family of putative integral membrane proteins is functionally uncharacterised. This family of proteins is found in actinobacteria. Proteins in this family are typically between 85 and 118 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF6804
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 98 and 195 amino acids in length and adopt a helix-rich bundle structure and share a similar fold with a flagellin homologue, hook-associated protein.
Protein Domain
Name: Protein of unknown function DUF6803
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria. Proteins in this family are typically between 162 and 222 amino acids in length. Structurally, proteins in this family are made of four-helix bundle.
Protein Domain
Name: Protein of unknown function DUF4784_N
Type: Domain
Description: This is a family of uncharacterised proteins from Bacteroidetes. This domain is found to the N-terminal of a WD40-like domain in DUF4784 family protein.
Protein Domain
Name: Protein of unknown function DUF2660
Type: Family
Description: This is a bacterial group of proteins with unknown function found in Rickettsiales.
Protein Domain
Name: Protein of unknown function DUF6806
Type: Family
Description: This family of proteins is functionally uncharacterised. This family of proteins is found in proteobacteria. Proteins in this family are approximately 210 amino acids in length and their N-terminal share a similar structure with the Crispr-associated endoribonuclease Cas2.
Protein Domain
Name: Protein of unknown function DUF2659
Type: Family
Description: This bacterial family of proteins has no known function.
Protein Domain
Name: Protein of unknown function DUF1202
Type: Family
Description: This family consists of several hypothetical bacterial proteins of around 335 residues in length. Members of this family are found exclusively in Escherichia coli and Salmonella species and are often referred to as YggM proteins. The function of this family is unknown.
Protein Domain
Name: Bacteriophage DNA replication protein Gp16.7
Type: Family
Description: The early-expressed gene 16.7 is conserved in bacteriophage phi-29 and related phages. It encodes a membrane protein, GP16.7, consisting of an N-terminal transmembrane domain and a C-terminal DNA-binding and dimerisation domain. GP16.7 plays an important role in organising membrane-associated bacteriophage DNA replication [ , ]. The C-terminal domain has a similar secondary structure similar to homeodomains, but forms a fundamentally different tertiary structure consisting of a six-helical dimeric fold [ ]. Multimerisation of this dimer leads to efficient DNA binding.
Protein Domain
Name: Protein of unknown function DUF2623
Type: Family
Description: This entry represents a group of proteins predominantly found in the Enterobacteriaceae family. Several members are named as YghW. The function is not known.
Protein Domain
Name: Protein of unknown function DUF2887
Type: Family
Description: This bacterial group of proteins has no known function.
Protein Domain
Name: Protein of unknown function DUF6601
Type: Family
Description: This entry represents a family found in fungi. The function of this region is unknown. It appears to contain a pair of C-terminal transmembrane helices.
Protein Domain
Name: Protein of unknown function DUF1207
Type: Family
Description: This family consists of a number of hypothetical bacterial proteins of around 410 residues in length, which seem to be specific to Chlamydia species. The function of this family is unknown.
Protein Domain
Name: Protein of unknown function DUF6600
Type: Family
Description: This entry represents a bacterial protein of unknown function. It is rich in conserved tryptophan residues and contains a central HYGRW motif that may be of functional importance.
Protein Domain
Name: Protein of unknown function DUF6599
Type: Family
Description: This entry represents a family of uncharacterised bacterial proteins.
Protein Domain
Name: Protein of unknown function DUF6598
Type: Domain
Description: This domain is found at the C-terminal of several plant proteins, including 60 kDa jasmonate-induced protein and in some fungal sequences. The function of the domain is unknown.
Protein Domain
Name: Protein of unknown function DUF6597
Type: Domain
Description: This presumed domain is found at the N-terminal of bacterial transcription factor proteins, including the uncharacterised HTH-type transcriptional regulator in mcrB 3'region from Streptomyces lavendulae, suggesting that this may be a regulatory domain that binds to some as yet unknown ligand.
Protein Domain
Name: Protein of unknown function DUF1152
Type: Family
Description: This family consists of proteins of unknown function.
Protein Domain
Name: Sperm acrosome membrane-associated protein 6
Type: Family
Description: Spaca6 is an immunoglobulin-like sperm protein required for sperm-oocyte fusion in mice [ , ].
Protein Domain
Name: Protein of unknown function DUF3466
Type: Family
Description: This family of bacterial proteins are functionally uncharacterised. Proteins in this family are typically between 564 to 612 amino acids in length.
Protein Domain
Name: Protein of unknown function DUF2608
Type: Family
Description: This entry represents a group of proteins predominantly found in Bacteria. The function is not known.
Protein Domain
Name: Protein of unknown function DUF6702
Type: Domain
Description: This entry represents an uncharacterised family of proteins. Some members of the family are annotated as Peptidase E, but the does not appear to be any evidence to support that assertion.
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