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Search results 601 to 700 out of 44733 for *

Category restricted to GOTerm (x)

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Categories

Category: GOTerm
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Type Details Score
GO Term
GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity
Description: Catalysis of the cleavage of the C-O-P bond in the AP site created when DNA glycosylase removes a damaged base, involved in the DNA base excision repair pathway (BER).
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GO Term
GO:0006284 | base-excision repair
Description: In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.
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GO Term
GO:0008534 | oxidized purine nucleobase lesion DNA N-glycosylase activity
Description: Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme-substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site.
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GO Term
GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds
Description: Catalysis of the hydrolysis of any N-glycosyl bond.
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GO Term
GO:0008312 | 7S RNA binding
Description: Interacting selectively and non-covalently with 7S RNA, the RNA component of the signal recognition particle (SRP).
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GO Term
GO:0048500 | signal recognition particle
Description: A complex of protein and RNA which facilitates translocation of proteins across membranes.
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GO Term
GO:0005681 | spliceosomal complex
Description: Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.
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GO Term
GO:0017070 | U6 snRNA binding
Description: Interacting selectively and non-covalently with the U6 small nuclear RNA (U6 snRNA).
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GO Term
GO:0030623 | U5 snRNA binding
Description: Interacting selectively and non-covalently with the U5 small nuclear RNA (U5 snRNA).
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GO Term
GO:0042586 | peptide deformylase activity
Description: Catalysis of the reaction: formyl-L-methionyl peptide + H2O = formate + methionyl peptide.
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GO Term
GO:0005643 | nuclear pore
Description: Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
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GO Term
GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives
Description: Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid.
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GO Term
GO:0036361 | racemase activity, acting on amino acids and derivatives
Description: Catalysis of the interconversion of the two enantiomers of a chiral amino acid or amino acid derivative.
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GO Term
GO:0004129 | cytochrome-c oxidase activity
Description: Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O.
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GO Term
GO:0005740 | mitochondrial envelope
Description: The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space.
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GO Term
GO:0005452 | inorganic anion exchanger activity
Description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion A(out) + inorganic anion B(in) = inorganic anion A(in) + inorganic anion B(out).
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GO Term
GO:0006820 | anion transport
Description: The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
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GO Term
GO:0005471 | ATP:ADP antiporter activity
Description: Catalysis of the reaction: ATP(out) + ADP(in) = ATP(in) + ADP(out).
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GO Term
GO:0000776 | kinetochore
Description: A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.
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GO Term
GO:0019237 | centromeric DNA binding
Description: Interacting selectively and non-covalently with a centromere, a region of chromosome where the spindle fibers attach during mitosis and meiosis.
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GO Term
GO:0051382 | kinetochore assembly
Description: The aggregation, arrangement and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.
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GO Term
GO:0008716 | D-alanine-D-alanine ligase activity
Description: Catalysis of the reaction: 2 D-alanine + ATP = D-alanyl-D-alanine + ADP + 2 H(+) + phosphate.
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GO Term
GO:0009252 | peptidoglycan biosynthetic process
Description: The chemical reactions and pathways resulting in the formation of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.
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GO Term
GO:0048037 | cofactor binding
Description: Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.
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GO Term
GO:0009522 | photosystem I
Description: A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
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GO Term
GO:0009538 | photosystem I reaction center
Description: A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.
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GO Term
GO:0004470 | malic enzyme activity
Description: Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.
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GO Term
GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity
Description: Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+.
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GO Term
GO:0000159 | protein phosphatase type 2A complex
Description: A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit.
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GO Term
GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
Description: All non-F1 subunits of the mitochondrial hydrogen-transporting ATP synthase, including integral and peripheral mitochondrial inner membrane proteins.
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GO Term
GO:0006066 | alcohol metabolic process
Description: The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.
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GO Term
GO:0008812 | choline dehydrogenase activity
Description: Catalysis of the reaction: A + choline = AH(2) + betaine aldehyde.
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GO Term
GO:0031204 | posttranslational protein targeting to membrane, translocation
Description: The process in which a protein translocates through the ER membrane posttranslationally.
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GO Term
GO:0005985 | sucrose metabolic process
Description: The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside.
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GO Term
GO:0016157 | sucrose synthase activity
Description: Catalysis of the reaction: UDP-glucose + D-fructose = UDP + sucrose.
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GO Term
GO:0005834 | heterotrimeric G-protein complex
Description: Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G protein-coupled receptors to an effector protein.
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GO Term
GO:0008234 | cysteine-type peptidase activity
Description: Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
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GO Term
GO:0006464 | cellular protein modification process
Description: The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
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GO Term
GO:0003729 | mRNA binding
Description: Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
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GO Term
GO:0005849 | mRNA cleavage factor complex
Description: Any macromolecular complex involved in cleavage or polyadenylation of mRNA molecules.
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GO Term
GO:0006378 | mRNA polyadenylation
Description: The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript.
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GO Term
GO:0016117 | carotenoid biosynthetic process
Description: The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.
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GO Term
GO:0004379 | glycylpeptide N-tetradecanoyltransferase activity
Description: Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide.
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GO Term
GO:0006499 | N-terminal protein myristoylation
Description: The covalent attachment of a myristoyl group to the N-terminal amino acid residue of a protein.
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GO Term
GO:0004144 | diacylglycerol O-acyltransferase activity
Description: Catalysis of the reaction: acyl-CoA + 1,2-diacylglycerol = CoA + triacylglycerol.
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GO Term
GO:0008374 | O-acyltransferase activity
Description: Catalysis of the transfer of an acyl group to an oxygen atom on the acceptor molecule.
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GO Term
GO:0019432 | triglyceride biosynthetic process
Description: The chemical reactions and pathways resulting in the formation of a triglyceride, any triester of glycerol.
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GO Term
GO:0003697 | single-stranded DNA binding
Description: Interacting selectively and non-covalently with single-stranded DNA.
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GO Term
GO:0008094 | DNA-dependent ATPase activity
Description: Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of single- or double-stranded DNA, and it drives another reaction.
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GO Term
GO:0009432 | SOS response
Description: An error-prone process for repairing damaged microbial DNA.
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GO Term
GO:0004435 | phosphatidylinositol phospholipase C activity
Description: Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1,2-diacylglycerol + 1D-myo-inositol 1,4,5-trisphosphate + H(+).
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GO Term
GO:0003909 | DNA ligase activity
Description: Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+.
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GO Term
GO:0051103 | DNA ligation involved in DNA repair
Description: The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA repair.
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GO Term
GO:0005543 | phospholipid binding
Description: Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.
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GO Term
GO:0005545 | 1-phosphatidylinositol binding
Description: Interacting selectively and non-covalently with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.
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GO Term
GO:0030118 | clathrin coat
Description: A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes.
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GO Term
GO:0030276 | clathrin binding
Description: Interacting selectively and non-covalently with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.
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GO Term
GO:0048268 | clathrin coat assembly
Description: The process that results in the assembly of clathrin triskelia into the ordered structure known as a clathrin cage.
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GO Term
GO:0007010 | cytoskeleton organization
Description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.
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GO Term
GO:0006754 | ATP biosynthetic process
Description: The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
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GO Term
GO:0004109 | coproporphyrinogen oxidase activity
Description: Catalysis of the reaction: coproporphyrinogen III + 2 H(+) + O(2) = 2 CO(2) + 2 H(2)O + protoporphyrinogen IX.
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GO Term
GO:0006779 | porphyrin-containing compound biosynthetic process
Description: The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.
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GO Term
GO:0006270 | DNA replication initiation
Description: The process in which DNA-dependent DNA replication is started; this begins with the ATP dependent loading of an initiator complex onto the DNA, this is followed by DNA melting and helicase activity. In bacteria, the gene products that enable the helicase activity are loaded after the initial melting and in archaea and eukaryotes, the gene products that enable the helicase activity are inactive when they are loaded and subsequently activate.
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GO Term
GO:0042555 | MCM complex
Description: A hexameric protein complex required for the initiation and regulation of DNA replication.
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GO Term
GO:0046658 | anchored component of plasma membrane
Description: The component of the plasma membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group, that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.
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GO Term
GO:0051716 | cellular response to stimulus
Description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus by a cell and ends with a change in state or activity or the cell.
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GO Term
GO:0031461 | cullin-RING ubiquitin ligase complex
Description: Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity.
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GO Term
GO:0031625 | ubiquitin protein ligase binding
Description: Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins.
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GO Term
GO:0006479 | protein methylation
Description: The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.
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GO Term
GO:0007076 | mitotic chromosome condensation
Description: The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells.
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GO Term
GO:0003995 | acyl-CoA dehydrogenase activity
Description: Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor.
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GO Term
GO:0035091 | phosphatidylinositol binding
Description: Interacting selectively and non-covalently with any inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives.
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GO Term
GO:0016042 | lipid catabolic process
Description: The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
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GO Term
GO:0009607 | response to biotic stimulus
Description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
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GO Term
GO:0004148 | dihydrolipoyl dehydrogenase activity
Description: Catalysis of the reaction: protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+.
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GO Term
GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
Description: Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces NAD or NADP.
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GO Term
GO:0003878 | ATP citrate synthase activity
Description: Catalysis of the reaction: acetyl-CoA + ADP + H(+) + oxaloacetate + phosphate = ATP + citrate + CoA.
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GO Term
GO:0004775 | succinate-CoA ligase (ADP-forming) activity
Description: Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate.
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GO Term
GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
Description: Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.
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GO Term
GO:0009584 | detection of visible light
Description: The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm.
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GO Term
GO:0009585 | red, far-red light phototransduction
Description: The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.
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GO Term
GO:0009881 | photoreceptor activity
Description: The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation.
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GO Term
GO:0017006 | protein-tetrapyrrole linkage
Description: The covalent linking of a tetrapyrrole to a protein.
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GO Term
GO:0018298 | protein-chromophore linkage
Description: The covalent or noncovalent attachment of a chromophore to a protein.
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GO Term
GO:0042803 | protein homodimerization activity
Description: Interacting selectively and non-covalently with an identical protein to form a homodimer.
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GO Term
GO:0016272 | prefoldin complex
Description: A multisubunit chaperone that is capable of delivering unfolded proteins to cytosolic chaperonin, which it acts as a cofactor for. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits. In Saccharomyces cerevisiae, it also acts in the nucleus to regulate the rate of elongation by RNA polymerase II via a direct effect on histone dynamics.
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GO Term
GO:0072546 | ER membrane protein complex
Description: A transmembrane protein complex located in the ER that is involved in ER-mitochondrial membrane tethering, which is required to facilitate lipid transfer from the ER to the mitochondrial membrane. In S. cerevisiae, it has six members: EMC1, EMC2, AIM27, EMC4, KRE27, and EMC6.
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GO Term
GO:0015914 | phospholipid transport
Description: The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester.
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GO Term
GO:0006415 | translational termination
Description: The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).
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GO Term
GO:0016149 | translation release factor activity, codon specific
Description: A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site.
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GO Term
GO:0004416 | hydroxyacylglutathione hydrolase activity
Description: Catalysis of the reaction: (S)-(2-hydroxyacyl)glutathione + H2O = glutathione + a 2-hydroxy carboxylate.
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GO Term
GO:0004174 | electron-transferring-flavoprotein dehydrogenase activity
Description: Catalysis of the reaction: reduced ETF + ubiquinone = ETF + ubiquinol.
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GO Term
GO:0004747 | ribokinase activity
Description: Catalysis of the reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate.
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GO Term
GO:0006014 | D-ribose metabolic process
Description: The chemical reactions and pathways involving D-ribose (ribo-pentose). As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.
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GO Term
GO:0008318 | protein prenyltransferase activity
Description: Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein.
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GO Term
GO:0018342 | protein prenylation
Description: The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.
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GO Term
GO:0004096 | catalase activity
Description: Catalysis of the reaction: 2 hydrogen peroxide = O2 + 2 H2O.
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GO Term
GO:0046373 | L-arabinose metabolic process
Description: The chemical reactions and pathways involving L-arabinose, the D-enantiomer of arabino-pentose. L-arabinose occurs free, e.g. in the heartwood of many conifers, and in the combined state, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides etc.
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GO Term
GO:0046556 | alpha-L-arabinofuranosidase activity
Description: Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.
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GO Term
GO:0019867 | outer membrane
Description: The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites.
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