v5.1.0.3
Glycine data from LIS
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Find genes for a given strain and annotation within a given region on a chromosome given by its name and assembly. Default: Gm01:1000000-2000000 on Wm82 gnm4, ann1.
Find GWAS that address a supplied trait, e.g. R8_full_maturity.
Display the proteins and their (truncated) sequences associated with a given gene (for a given assembly/annotation). Default: Glyma.01G000600 gnm4 ann1.
Find genes which are annotated by the given GO term for a given strain, assembly, and annotation. Default: photosynthesis for Wm82 gnm2 ann1.
Find genetic markers that are located within the given genomic region. Default: Gm01:1000000-2000000.
Find QTL studies that address a supplied trait, e.g. Seed weight.
Display the transcripts and their (truncated) sequences for a given gene. NOTE: you may see transcripts for a provided gene name on more than one assembly. Default: Glyma.01G005400.
Find genes that overlap genetic markers that are associated with a supplied trait (e.g. R8 full maturity) in GWAS.
Show features (usually genes) for which expression is above the given value in the selected sample.
Given a gene (and its assembly/annotation versions), provide its ontology annotations. Default gene: Glyma.12G011700, gnm4, ann1.
List genes whose description contains the given string, for genes from the given accession, assembly, and annotation. Default: HD-ZIP (Wm82, gnm4, ann1)
Enter a gene name, or select a list of genes that you have already saved, to produce a table of chromosome locations. (If you select a gene list, select it for both the gene and assembly version if you don't want to restrict your results to a single assembly version.)
given genes, provide their GO ontology annotations
Show the publications which include the selected author.
Find transcripts for genes with descriptions that included the supplied text, for a given strain, assembly and annotation. Default: HD-Zip (Wm82 gnm4/ann1)
Show the publications which contain the given string in their titles.
Find proteins for genes with descriptions that contain the given text (for a given strain assembly/annotation). Default: HD-Zip (Wm82 gnm4/ann1)
