LIS - Legume Information System
Information about legume traits for crop improvement
GlycineMine
v5.1.0.3
Glycine data from LIS
v5.1.0.3
Glycine data from LIS
| Synopsis | GWAS of soybean yield-related traits, conducted on 113 wild soybean accessions, genotyped with 85 simple sequence repeat (SSR) markers. |
| Genotyping Platform | Hu_Zhang_2014 |
| Genotypes | 113 wild soybean accessions |
| Description | To identify yield-enhancing quantitative trait locus (QTL) or gene from wild soybean, 113 wild soybeans accessions were phenotyped for five yield-related traits and genotyped with 85 simple sequence repeat (SSR) markers to conduct association mapping. A total of 892 alleles were detected for the 85 SSR markers, with an average 10.49 alleles; the corresponding PIC values ranged from 0.07 to 0.92, with an average 0.73. The genetic diversity of each SSR marker ranged from 0.07 to 0.93, with an average 0.75. A total of 18 SSR markers were identified for the five traits. Two SSR markers, sct_010 and satt316, which are associated with the yield per plant were stably expressed over two years at two experimental locations. |
| Genotyping Method | A total of 85 SSR markers representing 19 soybean chromosomes were selected from published genetic maps (Hwang et al. 2009, Song et al. 2004) to genotype the 113 wild soybean accessions. |
