v5.1.0.3
Glycine data from LIS
URL | https://data.legumeinfo.org/Glycine/max/markers/Wm82.gnm2.mrk.Fang_Ma_2017/ |
Description | To understand the genetic networks underlying phenotypic correlations, we collected 809 soybean accessions worldwide and phenotyped them for two years at three locations for 84 agronomic traits. Genome-wide association studies identified 245 significant genetic loci, among which 95 genetically interacted with other loci. We determined that 14 oil synthesis-related genes are responsible for fatty acid accumulation in soybean and function in line with an additive model. Network analyses demonstrated that 51 traits could be linked through the linkage disequilibrium of 115 associated loci and these links reflect phenotypic correlations. We revealed that 23 loci, including the known Dt1, E2, E1, Ln, Dt2, Fan, and Fap loci, as well as 16 undefined associated loci, have pleiotropic effects on different traits. |
Licence | ODC Public Domain Dedication and Licence (PDDL) |
DataSource | LIS Datastore |
Synopsis | GWAS of 84 agronomic traits, conducted on 809 soybean accessions, with genotyping by resequencing. |
Version | gnm2 |