Protein Domain : Cyclic phosphodiesterase IPR009097

Type  Homologous_superfamily
Description  This entry represents a β-barrel domain consisting of a duplication of a beta/alpha/beta/alpha/beta motif, which is found in plant cyclic phosphodiesterases (CPDases) [ ], as well as catalytic domains from mammalian 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNPase) [], and bacterial and archaeal LigT-like 2',3'-cyclic phosphodiesterases (originally identified as 2'-5' RNA ligases) []. This β-barrel domain is similar in structure to the β-barrel found in prokaryotic DNA topoisomerases I and III.The catalytic domain of CNPase from animals catalyzes the hydrolysis of nucleoside 2',3'-cyclic monophosphates to nucleoside 2'-monophosphates [ ]. The archaeobacterial LigT-like enzymes hydrolyze 2',3'-cyclic phosphate in (oligo)nucleotides and join the produced 2'-phosphate to a 5'-hydroxyl group of another (oligo)nucleotide to form atypical 2',5'-linkages. Such activity has not been reported for CNPase [].
Short Name  Cyclic_Pdiesterase

0 Child Features

2 Gene Families

320 Genes

0 Ontology Annotations

0 Parent Features

14 Publications

USDA
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