v5.1.0.3
Glycine data from LIS
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Find genes for a given strain and annotation within a given region on a chromosome given by its name and assembly. Default: Gm01:1000000-2000000 on Wm82 gnm4, ann1.
Find GWAS that address a supplied trait, e.g. R8_full_maturity.
Find genes which are annotated by the given GO term for a given strain, assembly, and annotation. Default: photosynthesis for Wm82 gnm2 ann1.
Display the proteins and their (truncated) sequences associated with a given gene (for a given assembly/annotation). Default: Glyma.01G000600 gnm4 ann1.
Find genetic markers that are located within the given genomic region. Default: Gm01:1000000-2000000.
Find QTL studies that address a supplied trait, e.g. Seed weight.
Display the transcripts and their (truncated) sequences for a given gene. NOTE: you may see transcripts for a provided gene name on more than one assembly. Default: Glyma.01G005400.
Find genes that overlap genetic markers that are associated with a supplied trait (e.g. R8 full maturity) in GWAS.
Show features (usually genes) for which expression is above the given value in the selected sample.
Given a gene (and its assembly/annotation versions), provide its ontology annotations. Default gene: Glyma.12G011700, gnm4, ann1.
List genes whose description contains the given string, for genes from the given accession, assembly, and annotation. Default: HD-ZIP (Wm82, gnm4, ann1)
Enter a gene name, or select a list of genes that you have already saved, to produce a table of chromosome locations. (If you select a gene list, select it for both the gene and assembly version if you don't want to restrict your results to a single assembly version.)
Show the publications which include the selected author.
given genes, provide their GO ontology annotations
Show the publications which contain the given string in their titles.
Find transcripts for genes with descriptions that included the supplied text, for a given strain, assembly and annotation. Default: HD-Zip (Wm82 gnm4/ann1)
Find proteins for genes with descriptions that contain the given text (for a given strain assembly/annotation). Default: HD-Zip (Wm82 gnm4/ann1)
