Data Sources and their Data Sets

CATHGENE3D
CDD
Chickpea Crop Ontology
A controlled vocabulary to describe crop traits in chickpea.
Chickpea Crop Ontology
Common Bean Crop Ontology
A controlled vocabulary to describe crop traits in common bean.
Common Bean Crop Ontology
Cowpea Crop Ontology
A controlled vocabulary to describe crop traits in cowpea.
Cowpea Crop Ontology
GO
The Gene Ontology (GO) knowledgebase is the world's largest source of information on the functions of genes. This knowledge is both human-readable and machine-readable, and is a foundation for computational analysis of large-scale molecular biology and genetics experiments in biomedical research.
GO
HAMAP
InterMine post-processor
Gene-flanking regions created by the core InterMine post-processor
InterMine gene-flanking regions
Intergenic regions created by the InterMine core post-processor
InterMine intergenic regions
InterPro
InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.
InterPro data set
Mapping of GO terms to InterPro entries.
InterPro domain GO annotations
LIS Datastore
Arachis duranensis organism and strain information.
description_Arachis_duranensis.yml
Arachis duranensis organism and strain information.
strains_Arachis_duranensis.yml
Arachis hypogaea organism and strain information.
description_Arachis_hypogaea.yml
Arachis hypogaea organism and strain information.
strains_Arachis_hypogaea.yml
Arachis ipaensis organism and strain information.
description_Arachis_ipaensis.yml
Arachis ipaensis organism and strain information.
strains_Arachis_ipaensis.yml
Black-eyed pea (IT97K-499-35) gene expression atlas from Yao, et al. (2016).
vigun.IT97K-499-35.gnm1.ann1.expr.BWH5.samples.tsv
Black-eyed pea (IT97K-499-35) gene expression atlas from Yao, et al. (2016).
vigun.IT97K-499-35.gnm1.ann1.expr.BWH5.source.tsv
Black-eyed pea (IT97K-499-35) gene expression atlas from Yao, et al. (2016).
vigun.IT97K-499-35.gnm1.ann1.expr.BWH5.values.tsv
CDS ann2 models for the vigun.IT97K-499-35.gnm1 genome
vigun.IT97K-499-35.gnm1.ann2.FD7K.cds_primaryTranscript.fna
CDS models for the aradu.V14167.gnm1 genome
aradu.V14167.gnm1.ann1.cxSM.cds.fna
CDS models for the arahy.Tifrunner.gnm1 genome
arahy.Tifrunner.gnm1.ann1.CCJH.cds_primaryTranscript.fna
CDS models for the arahy.Tifrunner.gnm2 genome
arahy.Tifrunner.gnm2.ann1.4K0L.cds_primaryTranscript.fna
CDS models for the araip.K30076.gnm1 genome
araip.K30076.gnm1.ann1.J37m.cds.fna
CDS models for the cicar.CDCFrontier.gnm1 genome
cicar.CDCFrontier.gnm1.ann1.nRhs.cds.fna
CDS models for the cicar.ICC4958.gnm2 genome
cicar.ICC4958.gnm2.ann1.LCVX.cds_primaryTranscript.fna
CDS models for the glyma.Lee.gnm1 genome
glyma.Lee.gnm1.ann1.6NZV.cds_primaryTranscript.fna
CDS models for the glyma.Wm82.gnm1 genome
glyma.Wm82.gnm1.ann1.DvBy.cds_primaryTranscript.fna
CDS models for the glyma.Wm82.gnm2 genome
glyma.Wm82.gnm2.ann1.RVB6.cds_primaryTranscript.fna
CDS models for the glyma.Wm82.gnm4 genome
glyma.Wm82.gnm4.ann1.T8TQ.cds_primaryTranscript.fna
CDS models for the glyma.Zh13.gnm1 genome
glyma.Zh13.gnm1.ann1.8VV3.cds_primaryTranscript.fna
CDS models for the glyso.PI483463.gnm1 genome
glyso.PI483463.gnm1.ann1.3Q3Q.cds_primaryTranscript.fna
CDS models for the glyso.W05.gnm1 genome
glyso.W05.gnm1.ann1.T47J.cds_primaryTranscript.fna
CDS models for the lupal.Amiga.gnm1 genome
lupal.Amiga.gnm1.ann0.3GKS.cds.fna
CDS models for the lupan.Tanjil.gnm1 genome
lupan.Tanjil.gnm1.ann1.nnV9.cds_all.fna
CDS models for the medsa.XinJiangDaYe.gnm1 genome
medsa.XinJiangDaYe.gnm1.ann1.RKB9.cds.fna
CDS models for the medtr.A17_HM341.gnm4 genome
medtr.A17_HM341.gnm4.ann2.G3ZY.cds_primaryTranscript.fna
CDS models for the medtr.R108_HM340.gnm1 genome
medtr.R108_HM340.gnm1.ann1.85YW.cds_primaryTranscript.fna
CDS models for the medtr.jemalong_A17.gnm5 genome
medtr.jemalong_A17.gnm5.ann1_6.L2RX.cds.fna
CDS models for the phalu.G27455.gnm1 genome
phalu.G27455.gnm1.ann1.JD7C.cds_primaryTranscript.fna
CDS models for the phavu.G19833.gnm1 genome
phavu.G19833.gnm1.ann1.pScz.cds_primaryTranscript.fna
CDS models for the phavu.G19833.gnm2 genome
phavu.G19833.gnm2.ann1.PB8d.cds_primaryTranscript.fna
CDS models for the phavu.UI111.gnm1 genome
phavu.UI111.gnm1.ann1.8L4N.cds_primaryTranscript.fna
CDS models for the vigan.Gyeongwon.gnm3 genome
vigan.Gyeongwon.gnm3.ann1.3Nz5.cds_primaryTranscript.fna
CDS models for the vigan.Shumari.gnm1 genome
vigan.Shumari.gnm1.ann1.8BRS.cds_primaryTranscript.fna
CDS models for the vigra.VC1973A.gnm6 genome
vigra.VC1973A.gnm6.ann1.M1Qs.cds.fna
CDS models for the vigun.CB5-2.gnm1 genome
vigun.CB5-2.gnm1.ann1.0GKC.cds_primaryTranscript.fna
CDS models for the vigun.IT97K-499-35.gnm1 genome
vigun.IT97K-499-35.gnm1.ann1.zb5D.cds_primaryTranscript.fna
CDS models for the vigun.Sanzi.gnm1 genome
vigun.Sanzi.gnm1.ann1.HFH8.cds_primaryTranscript.fna
CDS models for the vigun.Suvita2.gnm1 genome
vigun.Suvita2.gnm1.ann1.1PF6.cds_primaryTranscript.fna
CDS models for the vigun.TZ30.gnm1 genome
vigun.TZ30.gnm1.ann2.59NL.cds_primaryTranscript.fna
CDS models for the vigun.UCR779.gnm1 genome
vigun.UCR779.gnm1.ann1.VF6G.cds_primaryTranscript.fna
CDS models for the vigun.ZN016.gnm1 genome
vigun.ZN016.gnm1.ann2.C7YV.cds_primaryTranscript.fna
Cicer arietinum ICC4958 transcription during flower development from Singh, et al. (2013).
cicar.ICC4958.gnm2.ann1.expr.4Y7B.samples.tsv
Cicer arietinum ICC4958 transcription during flower development from Singh, et al. (2013).
cicar.ICC4958.gnm2.ann1.expr.4Y7B.source.tsv
Cicer arietinum ICC4958 transcription during flower development from Singh, et al. (2013).
cicar.ICC4958.gnm2.ann1.expr.4Y7B.values.tsv
Cicer arietinum organism and strain information.
description_Cicer_arietinum.yml
Cicer arietinum organism and strain information.
strains_Cicer_arietinum.yml
Cowpea 1M selected SNPs positions on the vigun.IT97K-499-35.gnm1 genome assembly
vigun.IT97K-499-35.gnm1.mrk.52FC.Cowpea1MSelectedSNPs.gff3
Cowpea SNP positions (Li et al. 2018) on the cicar.CDCFrontier.gnm263 (kabuli 2.6.3) genome assembly
cicar.CDCFrontier.gnm263.mrk.KEY4.29515606.gff3
Cowpea SNP positions on the cicar.CDCFrontier.gnm1 genome assembly from Varshney, et al. (2019)
cicar.CDCFrontier.gnm1.mrk.KEY4.31036963.gff3
Gene family assignments for Arachis duranensis V14167 genes and proteins.
aradu.V14167.gnm1.ann1.cxSM.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Arachis hypogaea Tifrunner gnm1 genes and proteins.
arahy.Tifrunner.gnm1.ann1.CCJH.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Arachis hypogaea Tifrunner gnm2 genes and proteins.
arahy.Tifrunner.gnm2.ann1.4K0L.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Arachis ipaensis K30076 genes and proteins.
araip.K30076.gnm1.ann1.J37m.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Cicer arietinum ICC4958 genes and proteins.
cicar.ICC4958.gnm2.ann1.LCVX.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Lupinus albus Amiga genes and proteins.
lupal.Amiga.gnm1.ann0.3GKS.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Lupinus angustifolius Tanjil genes and proteins.
lupan.Tanjil.gnm1.ann1.nnV9.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Phaseolus lunatus G27455 genes and proteins.
phalu.G27455.gnm1.ann1.JD7C.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Phaseolus vulgaris G19833 genes and proteins.
phavu.G19833.gnm2.ann1.PB8d.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Phaseolus vulgaris UI111 genes and proteins.
phavu.UI111.gnm1.ann1.8L4N.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna angularis Gyeongwon genes and proteins.
vigan.Gyeongwon.gnm3.ann1.3Nz5.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna angularis Shumari genes and proteins.
vigan.Shumari.gnm1.ann1.8BRS.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna radiata VC1973A genes and proteins.
vigra.VC1973A.gnm6.ann1.M1Qs.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna unguiculata CB5-2 genes and proteins.
vigun.CB5-2.gnm1.ann1.0GKC.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna unguiculata IT97K-499-35 genes and proteins.
vigun.IT97K-499-35.gnm1.ann2.FD7K.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna unguiculata Sanzi genes and proteins.
vigun.Sanzi.gnm1.ann1.HFH8.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna unguiculata Suvita2 genes and proteins.
vigun.Suvita2.gnm1.ann1.1PF6.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna unguiculata TZ30 genes and proteins.
vigun.TZ30.gnm1.ann2.59NL.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna unguiculata UCR779 genes and proteins.
vigun.UCR779.gnm1.ann1.VF6G.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna unguiculata Xiabao_II genes and proteins.
vigun.Xiabao_II.gnm1.ann1.4JFL.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for Vigna unguiculata ZN016 genes and proteins.
vigun.ZN016.gnm1.ann2.C7YV.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for glyma.Lee.gnm1 genes and proteins.
glyma.Lee.gnm1.ann1.6NZV.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for glyma.Wm82.gnm1 genes and proteins.
glyma.Wm82.gnm1.ann1.DvBy.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for glyma.Wm82.gnm2 genes and proteins.
glyma.Wm82.gnm2.ann1.RVB6.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for glyma.Wm82.gnm4 genes and proteins.
glyma.Wm82.gnm4.ann1.T8TQ.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for glyma.Zh13.gnm1 genes and proteins.
glyma.Zh13.gnm1.ann1.8VV3.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for glyso.PI483463.gnm1 genes and proteins.
glyso.PI483463.gnm1.ann1.3Q3Q.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for glyso.W05.gnm1 genes and proteins.
glyso.W05.gnm1.ann1.T47J.legfed_v1_0.M65K.gfa.tsv
Gene family assignments for phavu.G19833.gnm1 genes and proteins
phavu.G19833.gnm1.ann1.pScz.legfed_v1_0.M65K.gfa.tsv
Gene model annotation for the aradu.V14167.gnm1 genome
aradu.V14167.gnm1.ann1.cxSM.gene_models_main.gff3
Gene model annotation for the arahy.Tifrunner.gnm1 genome
arahy.Tifrunner.gnm1.ann1.CCJH.gene_models_main.gff3
Gene model annotation for the arahy.Tifrunner.gnm2 genome
arahy.Tifrunner.gnm2.ann1.4K0L.gene_models_main.gff3
Gene model annotation for the araip.K30076.gnm1 genome
araip.K30076.gnm1.ann1.J37m.gene_models_main.gff3
Gene model annotation for the cicar.CDCFrontier.gnm1 genome
cicar.CDCFrontier.gnm1.ann1.nRhs.gene_models_main.gff3
Gene model annotation for the cicar.CDCFrontier.gnm263 (kabuli 2.6.3) genome
cicar.CDCFrontier.gnm263.ann1.KEY4.gene_models_main.gff3
Gene model annotation for the cicar.ICC4958.gnm2 genome
cicar.ICC4958.gnm2.ann1.LCVX.gene_models_main.gff3
Gene model annotation for the glyma.Lee.gnm1 genome
glyma.Lee.gnm1.ann1.6NZV.gene_models_main.gff3
Gene model annotation for the glyma.Wm82.gnm1 genome
glyma.Wm82.gnm1.ann1.DvBy.gene_models_main.gff3
Gene model annotation for the glyma.Wm82.gnm2 genome
glyma.Wm82.gnm2.ann1.RVB6.gene_models_main.gff3
Gene model annotation for the glyma.Wm82.gnm4 genome
glyma.Wm82.gnm4.ann1.T8TQ.gene_models_main.gff3
Gene model annotation for the glyma.Zh13.gnm1 genome
glyma.Zh13.gnm1.ann1.8VV3.gene_models_main.gff3
Gene model annotation for the glyso.PI483463.gnm1 genome
glyso.PI483463.gnm1.ann1.3Q3Q.gene_models_main.gff3
Gene model annotation for the glyso.W05.gnm1 genome
glyso.W05.gnm1.ann1.T47J.gene_models_main.gff3
Gene model annotation for the lupal.Amiga.gnm1 genome
lupal.Amiga.gnm1.ann0.3GKS.gene_models_main.gff3
Gene model annotation for the lupan.Tanjil.gnm1 genome
lupan.Tanjil.gnm1.ann1.nnV9.gene_models_main.gff3
Gene model annotation for the medsa.XinJiangDaYe.gnm1 genome
medsa.XinJiangDaYe.gnm1.ann1.RKB9.gene_models_main.gff3
Gene model annotation for the medtr.A17_HM341.gnm4 genome
medtr.A17_HM341.gnm4.ann2.G3ZY.gene_models_main.gff3
Gene model annotation for the medtr.R108_HM340.gnm1 genome
medtr.R108_HM340.gnm1.ann1.85YW.gene_models_main.gff3
Gene model annotation for the medtr.jemalong_A17.gnm5 genome
medtr.jemalong_A17.gnm5.ann1_6.L2RX.gene_models_main.gff3
Gene model annotation for the phalu.G27455.gnm1 genome
phalu.G27455.gnm1.ann1.JD7C.gene_models_main.gff3
Gene model annotation for the phavu.G19833.gnm1 genome
phavu.G19833.gnm1.ann1.pScz.gene_models_main.gff3
Gene model annotation for the phavu.G19833.gnm2 genome
phavu.G19833.gnm2.ann1.PB8d.gene_models_main.gff3
Gene model annotation for the phavu.UI111.gnm1 genome
phavu.UI111.gnm1.ann1.8L4N.gene_models_main.gff3
Gene model annotation for the vigan.Gyeongwon.gnm3 genome
vigan.Gyeongwon.gnm3.ann1.3Nz5.gene_models_main.gff3
Gene model annotation for the vigan.Shumari.gnm1 genome
vigan.Shumari.gnm1.ann1.8BRS.gene_models_main.gff3
Gene model annotation for the vigra.VC1973A.gnm6 genome
vigra.VC1973A.gnm6.ann1.M1Qs.gene_models_main.gff3
Gene model annotation for the vigun.CB5-2.gnm1 genome
vigun.CB5-2.gnm1.ann1.0GKC.gene_models_main.gff3
Gene model annotation for the vigun.IT97K-499-35.gnm1 genome
vigun.IT97K-499-35.gnm1.ann1.zb5D.gene_models_main.gff3
Gene model annotation for the vigun.IT97K-499-35.gnm1 genome
vigun.IT97K-499-35.gnm1.ann2.FD7K.gene_models_main.gff3
Gene model annotation for the vigun.Sanzi.gnm1 genome
vigun.Sanzi.gnm1.ann1.HFH8.gene_models_main.gff3
Gene model annotation for the vigun.Suvita2.gnm1 genome
vigun.Suvita2.gnm1.ann1.1PF6.gene_models_main.gff3
Gene model annotation for the vigun.TZ30.gnm1 genome
vigun.TZ30.gnm1.ann2.59NL.gene_models_main.gff3
Gene model annotation for the vigun.UCR779.gnm1 genome
vigun.UCR779.gnm1.ann1.VF6G.gene_models_main.gff3
Gene model annotation for the vigun.Xiabao_II.gnm1 genome
vigun.Xiabao_II.gnm1.ann1.4JFL.gene_models_main.gff3
Gene model annotation for the vigun.ZN016.gnm1 genome
vigun.ZN016.gnm1.ann2.C7YV.gene_models_main.gff3
Genetic marker positions on the glyma.Wm82.gnm2 genome assembly
glyma.Wm82.gnm2.mrk.XJP2.gff3
Glycine max gene, protein and mRNA ontology annotations.
glyma.Lee.gnm1.ann1.6NZV.info_annot.txt
Glycine max gene, protein and mRNA ontology annotations.
glyma.Wm82.gnm1.ann1.DvBy.info_annot.txt
Glycine max gene, protein and mRNA ontology annotations.
glyma.Wm82.gnm2.ann1.RVB6.info_annot.txt
Glycine max gene, protein and mRNA ontology annotations.
glyma.Wm82.gnm4.ann1.T8TQ.info_annot.txt
Glycine max organism and strain information.
description_Glycine_max.yml
Glycine max organism and strain information.
strains_Glycine_max.yml
Glycine soja gene, protein and mRNA ontology annotations.
glyso.PI483463.gnm1.ann1.3Q3Q.info_annot.txt
Glycine soja organism and strain information.
description_Glycine_soja.yml
Glycine soja organism and strain information.
strains_Glycine_soja.yml
LIS Gene family membership for Cicer arietinum CDCFrontier.
cicar.CDCFrontier.gnm1.ann1.nRhs.legfed_v1_0.M65K.gfa.tsv
LIS datastore genomic FASTA file for Arachis duranensis V14167
aradu.V14167.gnm1.SWBf.genome_main.fna
LIS datastore genomic FASTA file for Arachis hypogaea Tifrunner
arahy.Tifrunner.gnm1.KYV3.genome_main.fna
LIS datastore genomic FASTA file for Arachis hypogaea Tifrunner
arahy.Tifrunner.gnm2.J5K5.genome_main.fna
LIS datastore genomic FASTA file for Arachis ipaensis K30076
araip.K30076.gnm1.bXJ8.genome_main.fna
LIS datastore genomic FASTA file for Cicer arietinum CDCFrontier
cicar.CDCFrontier.gnm1.GkHc.genome_main.fna
LIS datastore genomic FASTA file for Cicer arietinum CDCFrontier.gnm263 (kabuli 2.6.3)
cicar.CDCFrontier.gnm263.KEY4.genome_main.fna
LIS datastore genomic FASTA file for Cicer arietinum ICC4958
cicar.ICC4958.gnm2.bg5m.genome_main.fna
LIS datastore genomic FASTA file for Glycine max Lee
glyma.Lee.gnm1.BXNC.genome_main.fna
LIS datastore genomic FASTA file for Glycine max Wm82.gnm1
glyma.Wm82.gnm1.FCtY.genome_main.fna
LIS datastore genomic FASTA file for Glycine max Wm82.gnm2
glyma.Wm82.gnm2.DTC4.genome_main.fna
LIS datastore genomic FASTA file for Glycine max Wm82.gnm4
glyma.Wm82.gnm4.4PTR.genome_main.fna
LIS datastore genomic FASTA file for Glycine max Zh13
glyma.Zh13.gnm1.N6C8.genome_main.fna
LIS datastore genomic FASTA file for Glycine soja PI483463
glyso.PI483463.gnm1.YJWS.genome_main.fna
LIS datastore genomic FASTA file for Glycine soja W05
glyso.W05.gnm1.SVL1.genome_main.fna
LIS datastore genomic FASTA file for Lupinus albus Amiga
lupal.Amiga.gnm1.F4NR.genome_main.fna
LIS datastore genomic FASTA file for Lupinus angustifolius Tanjil
lupan.Tanjil.gnm1.Qq0N.genome_main.fna
LIS datastore genomic FASTA file for Medicago sativa XinJiangDaYe gnm1
medsa.XinJiangDaYe.gnm1.12MR.genome_main.fna
LIS datastore genomic FASTA file for Medicago truncatula A17_HM341
medtr.A17_HM341.gnm4.2GZ9.genome_main.fna
LIS datastore genomic FASTA file for Medicago truncatula R108_HM340
medtr.R108_HM340.gnm1.XT6J.genome_main.fna
LIS datastore genomic FASTA file for Medicago truncatula jemalong_A17
medtr.jemalong_A17.gnm5.MVZ2.genome_main.fna
LIS datastore genomic FASTA file for Phaseolus lunatus G27455
phalu.G27455.gnm1.7NXX.genome_main.fna
LIS datastore genomic FASTA file for Phaseolus vulgaris G19833
phavu.G19833.gnm1.zBnF.genome_main.fna
LIS datastore genomic FASTA file for Phaseolus vulgaris G19833
phavu.G19833.gnm2.fC0g.genome_main.fna
LIS datastore genomic FASTA file for Phaseolus vulgaris UI111
phavu.UI111.gnm1.3VTM.genome_main.fna
LIS datastore genomic FASTA file for Vigna angularis Gyeongwon
vigan.Gyeongwon.gnm3.JyYC.genome_main.fna
LIS datastore genomic FASTA file for Vigna angularis Shumari
vigan.Shumari.gnm1.V0CS.genome_main.fna
LIS datastore genomic FASTA file for Vigna radiata VC1973A
vigra.VC1973A.gnm6.3nL8.genome_main.fna
LIS datastore genomic FASTA file for Vigna unguiculata CB5-2
vigun.CB5-2.gnm1.WDTB.genome_main.fna
LIS datastore genomic FASTA file for Vigna unguiculata IT97K-499-35
vigun.IT97K-499-35.gnm1.QnBW.genome_main.fna
LIS datastore genomic FASTA file for Vigna unguiculata Sanzi
vigun.Sanzi.gnm1.YNCM.genome_main.fna
LIS datastore genomic FASTA file for Vigna unguiculata Suvita2
vigun.Suvita2.gnm1.5QLL.genome_main.fna
LIS datastore genomic FASTA file for Vigna unguiculata TZ30
vigun.TZ30.gnm1.TX9W.genome_main.fna
LIS datastore genomic FASTA file for Vigna unguiculata UCR779
vigun.UCR779.gnm1.M7KZ.genome_main.fna
LIS datastore genomic FASTA file for Vigna unguiculata Xiabao_II
vigun.Xiabao_II.gnm1.WDBP.genome_main.fna
LIS datastore genomic FASTA file for Vigna unguiculata ZN016
vigun.ZN016.gnm1.997F.genome_main.fna
LIS gene families
legume.genefam.fam1.M65K.info_annot_ahrd.tsv
LIS gene family assignments for medsa.XinJiangDaYe.gnm1
medsa.XinJiangDaYe.gnm1.ann1.RKB9.legfed_v1_0.M65K.gfa.tsv
LIS gene family assignments for medtr.A17_HM341.gnm4
medtr.A17_HM341.gnm4.ann2.G3ZY.legfed_v1_0.M65K.gfa.tsv
LIS gene family assignments for medtr.R108_HM340.gnm1
medtr.R108_HM340.gnm1.ann1.85YW.legfed_v1_0.M65K.gfa.tsv
LIS gene family assignments for medtr.jemalong_A17.gnm5
medtr.jemalong_A17.gnm5.ann1_6.L2RX.legfed_v1_0.M65K.gfa.tsv
Lupinus albus organism and strain information.
description_Lupinus_albus.yml
Lupinus albus organism and strain information.
strains_Lupinus_albus.yml
Lupinus angustifolius organism and strain information.
description_Lupinus_angustifolius.yml
Lupinus angustifolius organism and strain information.
strains_Lupinus_angustifolius.yml
MRNA models for the araip.K30076.gnm1 genome
araip.K30076.gnm1.ann1.J37m.transcript.fna
Medicago sativa organism and strain information.
description_Medicago_sativa.yml
Medicago sativa organism and strain information.
strains_Medicago_sativa.yml
Medicago truncatula organism and strain information.
description_Medicago_truncatula.yml
Medicago truncatula organism and strain information.
strains_Medicago_truncatula.yml
Phaseolus lunatus organism and strain information.
description_Phaseolus_lunatus.yml
Phaseolus lunatus organism and strain information.
strains_Phaseolus_lunatus.yml
Phaseolus vulgaris cv. Negro jamapa gene expression atlas from O'Rourke, et al. (2014).
phavu.G19833.gnm1.ann1.expr.4ZDQ.samples.tsv
Phaseolus vulgaris cv. Negro jamapa gene expression atlas from O'Rourke, et al. (2014).
phavu.G19833.gnm1.ann1.expr.4ZDQ.source.tsv
Phaseolus vulgaris cv. Negro jamapa gene expression atlas from O'Rourke, et al. (2014).
phavu.G19833.gnm1.ann1.expr.4ZDQ.values.tsv
Phaseolus vulgaris gene, protein and mRNA ontology annotations.
phavu.G19833.gnm1.ann1.pScz.info_annot.txt
Phaseolus vulgaris gene, protein and mRNA ontology annotations.
phavu.G19833.gnm2.ann1.PB8d.info_annot.txt
Phaseolus vulgaris gene, protein and mRNA ontology annotations.
phavu.UI111.gnm1.ann1.8L4N.info_annot.txt
Phaseolus vulgaris organism and strain information.
description_Phaseolus_vulgaris.yml
Phaseolus vulgaris organism and strain information.
strains_Phaseolus_vulgaris.yml
Plant Reactome assignments for Phaseolus lunatus G27455 genes, via gene familie membership with Phaseolus vulgaris genes.
phalu.G27455.gnm1.ann1.JD7C.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathway assignments for Lupinus albus Amiga genes via gene family membership with Lupinus angustifolius genes.
lupal.Amiga.gnm1.ann0.3GKS.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathway assignments for Lupinus angustifolius Tanjil genes.
lupan.Tanjil.gnm1.ann1.nnV9.pathway.tsv
Plant Reactome pathway assignments for glyma.Lee.gnm1 genes.
glyma.Lee.gnm1.ann1.6NZV.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathway assignments for glyma.Wm82.gnm1 genes.
glyma.Wm82.gnm1.ann1.DvBy.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathway assignments for glyma.Wm82.gnm2 genes.
glyma.Wm82.gnm2.ann1.RVB6.pathway.tsv
Plant Reactome pathway assignments for glyma.Wm82.gnm4 genes.
glyma.Wm82.gnm4.ann1.T8TQ.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathway assignments for glyma.Zh13.gnm1 genes.
glyma.Zh13.gnm1.ann1.8VV3.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathway assignments for glyso.PI483463.gnm1 genes.
glyso.PI483463.gnm1.ann1.3Q3Q.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathway assignments for glyso.W05.gnm1 genes.
glyso.W05.gnm1.ann1.T47J.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathway assignments for phavu.UI111.gnm1 genes via gene family membership with phavu.G19833 genes.
phavu.UI111.gnm1.ann1.8L4N.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathways for Cicer arietinum CDCFrontier.
cicar.CDCFrontier.gnm1.ann1.nRhs.pathway.tsv
Plant Reactome pathways for aradu.V14167.gnm1
aradu.V14167.gnm1.ann1.cxSM.pathway.tsv
Plant Reactome pathways for arahy.Tifrunner.gnm1
arahy.Tifrunner.gnm1.ann1.CCJH.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathways for arahy.Tifrunner.gnm2
arahy.Tifrunner.gnm2.ann1.4K0L.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathways for araip.K30076.gnm1
araip.K30076.gnm1.ann1.J37m.pathway.tsv
Plant Reactome pathways for medsa.XinJiangDaYe.gnm1 via gene family membership with R108_HM340.
medsa.XinJiangDaYe.gnm1.ann1.RKB9.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathways for medtr.A17_HM341.gnm4
medtr.A17_HM341.gnm4.ann2.G3ZY.pathway.tsv
Plant Reactome pathways for medtr.R108_HM340.gnm1 via gene family membership with R108_HM340.
medtr.R108_HM340.gnm1.ann1.85YW.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathways for medtr.jemalong_A17.gnm5 via gene family membership with R108_HM340.
medtr.jemalong_A17.gnm5.ann1_6.L2RX.legfed_v1_0.M65K.pathway.tsv
Plant Reactome pathways for phavu.G19833.gnm1
phavu.G19833.gnm1.ann1.pScz.pathway.tsv
Plant Reactome pathways for phavu.G19833.gnm2
phavu.G19833.gnm2.ann1.PB8d.pathway.tsv
Plant reactome pathways for Cicer arietinum ICC4958 genes from gene family membership with Cicer arietinum CDCFrontier genes.
cicar.ICC4958.gnm2.ann1.LCVX.legfed_v1_0.M65K.pathway.tsv
Plant reactome pathways for Vigna angularis Gyeongwon genes via gene family membership with Vigna radiata.
vigan.Gyeongwon.gnm3.ann1.3Nz5.legfed_v1_0.M65K.pathway.tsv
Plant reactome pathways for Vigna angularis Shumari genes via gene family membership with Vigna radiata.
vigan.Shumari.gnm1.ann1.8BRS.legfed_v1_0.M65K.pathway.tsv
Plant reactome pathways for Vigna radiata VC1973A genes.
vigra.VC1973A.gnm6.ann1.M1Qs.pathway.tsv
Plant reactome pathways for Vigna unguiculata CB5-2 genes via gene family membership with Vigna radiata.
vigun.CB5-2.gnm1.ann1.0GKC.legfed_v1_0.M65K.pathway.tsv
Plant reactome pathways for Vigna unguiculata IT97K-499-35 genes via gene family membership with Vigna radiata.
vigun.IT97K-499-35.gnm1.ann2.FD7K.legfed_v1_0.M65K.pathway.tsv
Plant reactome pathways for Vigna unguiculata Sanzi genes via gene family membership with Vigna radiata.
vigun.Sanzi.gnm1.ann1.HFH8.legfed_v1_0.M65K.pathway.tsv
Plant reactome pathways for Vigna unguiculata Suvita2 genes via gene family membership with Vigna radiata.
vigun.Suvita2.gnm1.ann1.1PF6.legfed_v1_0.M65K.pathway.tsv
Plant reactome pathways for Vigna unguiculata TZ30 genes via gene family membership with Vigna radiata.
vigun.TZ30.gnm1.ann2.59NL.legfed_v1_0.M65K.pathway.tsv
Plant reactome pathways for Vigna unguiculata UCR779 genes via gene family membership with Vigna radiata.
vigun.UCR779.gnm1.ann1.VF6G.legfed_v1_0.M65K.pathway.tsv
Plant reactome pathways for Vigna unguiculata Xiabao_II genes via gene family membership with Vigna radiata.
vigun.Xiabao_II.gnm1.ann1.4JFL.legfed_v1_0.M65K.pathway.tsv
Plant reactome pathways for Vigna unguiculata ZN016 genes via gene family membership with Vigna radiata.
vigun.ZN016.gnm1.ann2.C7YV.legfed_v1_0.M65K.pathway.tsv
Protein models for the aradu.V14167.gnm1 genome
aradu.V14167.gnm1.ann1.cxSM.protein.faa
Protein models for the arahy.Tifrunner.gnm1 genome
arahy.Tifrunner.gnm1.ann1.CCJH.protein_primaryTranscript.faa
Protein models for the arahy.Tifrunner.gnm2 genome
arahy.Tifrunner.gnm2.ann1.4K0L.protein_primaryTranscript.faa
Protein models for the araip.K30076.gnm1 genome
araip.K30076.gnm1.ann1.J37m.protein.faa
Protein models for the cicar.CDCFrontier.gnm1 genome
cicar.CDCFrontier.gnm1.ann1.nRhs.protein.faa
Protein models for the cicar.ICC4958.gnm2 genome
cicar.ICC4958.gnm2.ann1.LCVX.protein_primaryTranscript.faa
Protein models for the glyma.Lee.gnm1 genome
glyma.Lee.gnm1.ann1.6NZV.protein_primaryTranscript.faa
Protein models for the glyma.Wm82.gnm1 genome
glyma.Wm82.gnm1.ann1.DvBy.protein_primaryTranscript.faa
Protein models for the glyma.Wm82.gnm2 genome
glyma.Wm82.gnm2.ann1.RVB6.protein_primaryTranscript.faa
Protein models for the glyma.Wm82.gnm4 genome
glyma.Wm82.gnm4.ann1.T8TQ.protein_primaryTranscript.faa
Protein models for the glyma.Zh13.gnm1 genome
glyma.Zh13.gnm1.ann1.8VV3.protein_primaryTranscript.faa
Protein models for the glyso.PI483463.gnm1 genome
glyso.PI483463.gnm1.ann1.3Q3Q.protein_primaryTranscript.faa
Protein models for the glyso.W05.gnm1 genome
glyso.W05.gnm1.ann1.T47J.protein_primaryTranscript.faa
Protein models for the lupal.Amiga.gnm1 genome
lupal.Amiga.gnm1.ann0.3GKS.protein.faa
Protein models for the lupan.Tanjil.gnm1 genome
lupan.Tanjil.gnm1.ann1.nnV9.protein.faa
Protein models for the medsa.XinJiangDaYe.gnm1 genome
medsa.XinJiangDaYe.gnm1.ann1.RKB9.protein.faa
Protein models for the medtr.A17_HM341.gnm4 genome
medtr.A17_HM341.gnm4.ann2.G3ZY.protein_primaryTranscript.faa
Protein models for the medtr.R108_HM340.gnm1 genome
medtr.R108_HM340.gnm1.ann1.85YW.protein_primaryTranscript.faa
Protein models for the medtr.jemalong_A17.gnm5 genome
medtr.jemalong_A17.gnm5.ann1_6.L2RX.protein.faa
Protein models for the phalu.G27455.gnm1 genome
phalu.G27455.gnm1.ann1.JD7C.protein_primaryTranscript.faa
Protein models for the phavu.G19833.gnm1 genome
phavu.G19833.gnm1.ann1.pScz.protein_primaryTranscript.faa
Protein models for the phavu.G19833.gnm2 genome
phavu.G19833.gnm2.ann1.PB8d.protein_primaryTranscript.faa
Protein models for the phavu.UI111.gnm1 genome
phavu.UI111.gnm1.ann1.8L4N.protein_primaryTranscript.faa
Protein models for the vigan.Gyeongwon.gnm3 genome
vigan.Gyeongwon.gnm3.ann1.3Nz5.protein_primaryTranscript.faa
Protein models for the vigan.Shumari.gnm1 genome
vigan.Shumari.gnm1.ann1.8BRS.protein_primaryTranscript.faa
Protein models for the vigra.VC1973A.gnm6 genome
vigra.VC1973A.gnm6.ann1.M1Qs.protein.faa
Protein models for the vigun.CB5-2.gnm1 genome
vigun.CB5-2.gnm1.ann1.0GKC.protein_primaryTranscript.faa
Protein models for the vigun.IT97K-499-35.gnm1 genome
vigun.IT97K-499-35.gnm1.ann1.zb5D.protein_primaryTranscript.faa
Protein models for the vigun.IT97K-499-35.gnm1 genome
vigun.IT97K-499-35.gnm1.ann1.zb5D.transcript_primaryTranscript.fna
Protein models for the vigun.Sanzi.gnm1 genome
vigun.Sanzi.gnm1.ann1.HFH8.protein_primaryTranscript.faa
Protein models for the vigun.Suvita2.gnm1 genome
vigun.Suvita2.gnm1.ann1.1PF6.protein_primaryTranscript.faa
Protein models for the vigun.TZ30.gnm1 genome
vigun.TZ30.gnm1.ann2.59NL.protein_primaryTranscript.faa
Protein models for the vigun.UCR779.gnm1 genome
vigun.UCR779.gnm1.ann1.VF6G.protein_primaryTranscript.faa
Protein models for the vigun.Xiabao_II.gnm1 genome
vigun.Xiabao_II.gnm1.ann1.4JFL.protein.faa
Protein models for the vigun.ZN016.gnm1 genome
vigun.ZN016.gnm1.ann2.C7YV.protein_primaryTranscript.faa
Soybean gene expression atlas from the Libault Lab.
glyma.Wm82.gnm2.ann1.expr.G7ZY.samples.tsv
Soybean gene expression atlas from the Libault Lab.
glyma.Wm82.gnm2.ann1.expr.G7ZY.source.tsv
Soybean gene expression atlas from the Libault Lab.
glyma.Wm82.gnm2.ann1.expr.G7ZY.values.tsv
Synteny between Lupinus angustifolius Tanjil.gnm1 and other species.
lupan.Tanjil.gnm1.ann1.x.aradu.V14167.gnm1.ann1.gff
Synteny between Lupinus angustifolius Tanjil.gnm1 and other species.
lupan.Tanjil.gnm1.ann1.x.araip.K30076.gnm1.ann1.gff
Synteny between Lupinus angustifolius Tanjil.gnm1 and other species.
lupan.Tanjil.gnm1.ann1.x.glyma.Wm82.gnm2.ann1.gff
Synteny between Lupinus angustifolius Tanjil.gnm1 and other species.
lupan.Tanjil.gnm1.ann1.x.lotja.MG20.gnm3.ann1.gff
Synteny between Lupinus angustifolius Tanjil.gnm1 and other species.
lupan.Tanjil.gnm1.ann1.x.lupan.Tanjil.gnm1.ann1.gff
Synteny between Lupinus angustifolius Tanjil.gnm1 and other species.
lupan.Tanjil.gnm1.ann1.x.medtr.A17_HM341.gnm4.ann2.gff
Synteny between Lupinus angustifolius Tanjil.gnm1 and other species.
lupan.Tanjil.gnm1.ann1.x.phavu.G19833.gnm1.ann1.gff
Synteny between Vigna angularis Gyeongwon.gnm3 and other species and strains.
vigan.Gyeongwon.v3.x.cajca.ICPL87119.v1.gff
Synteny between Vigna angularis Gyeongwon.gnm3 and other species and strains.
vigan.Gyeongwon.v3.x.glyma.Wm82.a2.gff
Synteny between Vigna angularis Gyeongwon.gnm3 and other species and strains.
vigan.Gyeongwon.v3.x.phavu.G19833.v1.gff
Synteny between Vigna angularis Gyeongwon.gnm3 and other species and strains.
vigan.Gyeongwon.v3.x.phavu.G19833.v2.gff
Synteny between Vigna angularis Gyeongwon.gnm3 and other species and strains.
vigan.Gyeongwon.v3.x.vigan.Gyeongwon.v3.gff
Synteny between Vigna angularis Gyeongwon.gnm3 and other species and strains.
vigan.Gyeongwon.v3.x.vigra.VC1973A.v6.gff
Synteny between aradu.V14167.gnm1 and other species.
aradu.V14167.gnm1.ann1.x.aradu.V14167.gnm1.ann1.gff
Synteny between aradu.V14167.gnm1 and other species.
aradu.V14167.gnm1.ann1.x.araip.K30076.gnm1.ann1.gff
Synteny between aradu.V14167.gnm1 and other species.
aradu.V14167.gnm1.ann1.x.glyma.Wm82.gnm2.ann1.gff
Synteny between aradu.V14167.gnm1 and other species.
aradu.V14167.gnm1.ann1.x.lupan.Tanjil.gnm1.ann1.gff
Synteny between aradu.V14167.gnm1 and other species.
aradu.V14167.gnm1.ann1.x.medtr.A17_HM341.gnm4.ann2.gff
Synteny between aradu.V14167.gnm1 and other species.
aradu.V14167.gnm1.ann1.x.phavu.G19833.gnm1.ann1.gff
Synteny between aradu.V14167.gnm1 and other species.
aradu.V14167.gnm1.ann1.x.phavu.G19833.gnm2.ann1.gff
Synteny between aradu.V14167.gnm1 and other species.
aradu.V14167.gnm1.ann1.x.vigra.VC1973A.gnm6.ann1.gff
Synteny between araip.K30076.gnm1 and other species.
araip.K30076.gnm1.ann1.x.aradu.V14167.gnm1.ann1.gff
Synteny between araip.K30076.gnm1 and other species.
araip.K30076.gnm1.ann1.x.araip.K30076.gnm1.ann1.gff
Synteny between araip.K30076.gnm1 and other species.
araip.K30076.gnm1.ann1.x.glyma.Wm82.gnm2.ann1.gff
Synteny between araip.K30076.gnm1 and other species.
araip.K30076.gnm1.ann1.x.lupan.Tanjil.gnm1.ann1.gff
Synteny between araip.K30076.gnm1 and other species.
araip.K30076.gnm1.ann1.x.medtr.A17_HM341.gnm4.ann2.gff
Synteny between araip.K30076.gnm1 and other species.
araip.K30076.gnm1.ann1.x.phavu.G19833.gnm1.ann1.gff
Synteny between araip.K30076.gnm1 and other species.
araip.K30076.gnm1.ann1.x.phavu.G19833.gnm2.ann1.gff
Synteny between araip.K30076.gnm1 and other species.
araip.K30076.gnm1.ann1.x.vigra.VC1973A.gnm6.ann1.gff
Synteny between cicar.CDCFrontier.gnm1 and other species.
cicar.CDCFrontier.gnm1.ann1.x.cicar.CDCFrontier.gnm1.ann1.gff
Synteny between cicar.CDCFrontier.gnm1 and other species.
cicar.CDCFrontier.gnm1.ann1.x.cicar.ICC4958.gnm2.ann1.gff
Synteny between cicar.CDCFrontier.gnm1 and other species.
cicar.CDCFrontier.gnm1.ann1.x.lotja.MG20.gnm3.ann1.gff
Synteny between cicar.CDCFrontier.gnm1 and other species.
cicar.CDCFrontier.gnm1.ann1.x.medtr.A17_HM341.gnm4.ann2.gff
Synteny between cicar.CDCFrontier.gnm1 and other species.
cicar.CDCFrontier.gnm1.ann1.x.tripr.MilvusB.gnm2.ann1.gff
Synteny between cicar.ICC4958.gnm2 and other species.
cicar.ICC4958.gnm2.ann1.x.cicar.CDCFrontier.gnm1.ann1.gff
Synteny between cicar.ICC4958.gnm2 and other species.
cicar.ICC4958.gnm2.ann1.x.cicar.ICC4958.gnm2.ann1.gff
Synteny between cicar.ICC4958.gnm2 and other species.
cicar.ICC4958.gnm2.ann1.x.lotja.MG20.gnm3.ann1.gff
Synteny between cicar.ICC4958.gnm2 and other species.
cicar.ICC4958.gnm2.ann1.x.medtr.A17_HM341.gnm4.ann2.gff
Synteny between cicar.ICC4958.gnm2 and other species.
cicar.ICC4958.gnm2.ann1.x.tripr.MilvusB.gnm2.ann1.gff
Synteny between cowpea IT97K-499-35.gnm1 and other species and strains.
vigun.IT97K-499-35.gnm1.x.glyma.Wm82.gnm2.gff
Synteny between cowpea IT97K-499-35.gnm1 and other species and strains.
vigun.IT97K-499-35.gnm1.x.phavu.G19833.gnm1.gff
Synteny between cowpea IT97K-499-35.gnm1 and other species and strains.
vigun.IT97K-499-35.gnm1.x.vigan.Gyeongwon.gnm3.gff
Synteny between cowpea IT97K-499-35.gnm1 and other species and strains.
vigun.IT97K-499-35.gnm1.x.vigra.VC1973A.gnm6.gff
Synteny between cowpea IT97K-499-35.gnm1 and other species and strains.
vigun.IT97K-499-35.gnm1.x.vigun.IT97K-499-35.gnm1.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.aradu.V14167.gnm1.ann1.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.araip.K30076.gnm1.ann1.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.cajca.ICPL87119.gnm1.ann1.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.glyma.Wm82.gnm2.ann1.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.lotja.MG20.gnm3.ann1.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.lupan.Tanjil.gnm1.ann1.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.medtr.A17_HM341.gnm4.ann2.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.phavu.G19833.gnm1.ann1.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.phavu.G19833.gnm2.ann1.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.vigan.Gyeongwon.gnm3.ann1.gff
Synteny between phavu.G19833.gnm1 and other species.
phavu.G19833.gnm1.ann1.x.vigra.VC1973A.gnm6.ann1.gff
Synteny between phavu.G19833.gnm2 and other species.
phavu.G19833.v2.x.aradu.V14167.v1.gff
Synteny between phavu.G19833.gnm2 and other species.
phavu.G19833.v2.x.araip.K30076.v1.gff
Synteny between phavu.G19833.gnm2 and other species.
phavu.G19833.v2.x.cajca.ICPL87119.v1.gff
Synteny between phavu.G19833.gnm2 and other species.
phavu.G19833.v2.x.glyma.Wm82.a2.gff
Synteny between phavu.G19833.gnm2 and other species.
phavu.G19833.v2.x.lotja.MG20.v3.gff
Synteny between phavu.G19833.gnm2 and other species.
phavu.G19833.v2.x.medtr.A17_HM341.v4.gff
Synteny between phavu.G19833.gnm2 and other species.
phavu.G19833.v2.x.phavu.G19833.v1.gff
Synteny between phavu.G19833.gnm2 and other species.
phavu.G19833.v2.x.vigan.Gyeongwon.v3.gff
Synteny between phavu.G19833.gnm2 and other species.
phavu.G19833.v2.x.vigra.VC1973A.v6.gff
Synteny between soybean Wm82.gnm2 and other species.
glyma.Wm82.gnm2.ann1.x.aradu.V14167.gnm1.ann1.gff
Synteny between soybean Wm82.gnm2 and other species.
glyma.Wm82.gnm2.ann1.x.araip.K30076.gnm1.ann1.gff
Synteny between soybean Wm82.gnm2 and other species.
glyma.Wm82.gnm2.ann1.x.cajca.ICPL87119.gnm1.ann1.gff
Synteny between soybean Wm82.gnm2 and other species.
glyma.Wm82.gnm2.ann1.x.lotja.MG20.gnm3.ann1.gff
Synteny between soybean Wm82.gnm2 and other species.
glyma.Wm82.gnm2.ann1.x.lupan.Tanjil.gnm1.ann1.gff
Synteny between soybean Wm82.gnm2 and other species.
glyma.Wm82.gnm2.ann1.x.medtr.A17_HM341.gnm4.ann2.gff
Synteny between soybean Wm82.gnm2 and other species.
glyma.Wm82.gnm2.ann1.x.phavu.G19833.gnm1.ann1.gff
Synteny between soybean Wm82.gnm2 and other species.
glyma.Wm82.gnm2.ann1.x.phavu.G19833.gnm2.ann1.gff
Synteny between soybean Wm82.gnm2 and other species.
glyma.Wm82.gnm2.ann1.x.vigan.Gyeongwon.gnm3.ann1.gff
Synteny between soybean Wm82.gnm2 and other species.
glyma.Wm82.gnm2.ann1.x.vigra.VC1973A.gnm6.ann1.gff
Vigna angularis organism and strain information.
description_Vigna_angularis.yml
Vigna angularis organism and strain information.
strains_Vigna_angularis.yml
Vigna radiata organism and strain information.
description_Vigna_radiata.yml
Vigna radiata organism and strain information.
strains_Vigna_radiata.yml
Vigna unguiculata organism and strain information.
description_Vigna_unguiculata.yml
Vigna unguiculata organism and strain information.
strains_Vigna_unguiculata.yml
mRNA models for the aradu.V14167.gnm1 genome
aradu.V14167.gnm1.ann1.cxSM.transcript.fna
mRNA models for the arahy.Tifrunner.gnm1 genome
arahy.Tifrunner.gnm1.ann1.CCJH.transcript_primaryTranscript.fna
mRNA models for the arahy.Tifrunner.gnm2 genome
arahy.Tifrunner.gnm2.ann1.4K0L.transcript_primaryTranscript.fna
mRNA models for the glyma.Lee.gnm1 genome
glyma.Lee.gnm1.ann1.6NZV.transcript_primaryTranscript.fna
mRNA models for the glyma.Wm82.gnm1 genome
glyma.Wm82.gnm1.ann1.DvBy.transcript_primaryTranscript.fna
mRNA models for the glyma.Wm82.gnm2 genome
glyma.Wm82.gnm2.ann1.RVB6.transcript_primaryTranscript.fna
mRNA models for the glyma.Wm82.gnm4 genome
glyma.Wm82.gnm4.ann1.T8TQ.transcript_primaryTranscript.fna
mRNA models for the glyso.PI483463.gnm1 genome
glyso.PI483463.gnm1.ann1.3Q3Q.transcript_primaryTranscript.fna
mRNA models for the lupal.Amiga.gnm1 genome
lupal.Amiga.gnm1.ann0.3GKS.mRNA.fna
mRNA models for the phalu.G27455.gnm1 genome
phalu.G27455.gnm1.ann1.JD7C.transcript_primaryTranscript.fna
mRNA models for the phavu.G19833.gnm1 genome
phavu.G19833.gnm1.ann1.pScz.transcript_primaryTranscript.fna
mRNA models for the phavu.G19833.gnm2 genome
phavu.G19833.gnm2.ann1.PB8d.transcript_primaryTranscript.fna
mRNA models for the phavu.UI111.gnm1 genome
phavu.UI111.gnm1.ann1.8L4N.transcript_primaryTranscript.fna
mRNA models for the vigan.Shumari.gnm1 genome
vigan.Shumari.gnm1.ann1.8BRS.transcript.fna
Mungbean Crop Ontology
A controlled vocabulary to describe crop traits in mungbean.
Mungbean Crop Ontology
PANTHER
PFAM
PIRSF
PRINTS
PROFILE
PROSITE
Plant Ontology
The Plant Ontology (PO) is a community resource consisting of standardized terms, definitions, and logical relations describing plant structures and development stages, augmented by a large database of annotations from genomic and phenomic studies.
Plant Ontology
Plant Trait Ontology
A controlled vocabulary of describe phenotypic traits in plants.
Plant Trait Ontology
SFLD
SMART
SSF
Sequence Ontology
The Sequence Ontology is a set of terms and relationships used to describe the features and attributes of biological sequence.
Sequence Ontology
Soybean Crop Ontology
A controlled vocabulary to describe crop traits in soybean.
Soybean Crop Ontology
Soybean Growth and Trait Ontology V3.0 revision 1.0
Currently, there are 4 divisions to SOY terms, soybean structural terms (Soybean Structure Ontology), developmental stages (Soybean Developmental Ontology), whole plant development terms (Soybean Whole Plant Growth Stages) and trait terms (Soybean Trait Ontology).
Soybean Growth and Trait Ontology V3.0 revision 1.0
TIGRFAMs
null
Illumina GoldenGate SNP positions on the phavu.G19833.gnm1 genome assembly
phavu.G19833.gnm1.mrk.7KYW.PvCookUCDavis2009.gff3
USDA
Legume Federation
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The Legume Information System (LIS) is a research project of the USDA-ARS:Corn Insects and Crop Genetics Research in Ames, IA.
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