Search

Search VignaMine. Enter names, identifiers or keywords for genes, proteins, GO terms, QTLs, linkage groups, etc. Examples: Vigun03g155300, legfed_v1_0.L_456XN9, TEL2.

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Enter a list of identifiers.

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VignaMine integrates genomic and genetic data for cowpea, Vigna unguiculata, mostly from the UC-Riverside group.
It is built from LIS datastore files. Contact Sam Hokin shokin at ncgr dot org.

Check out the templates we've built to help you find stuff! Let us know if there's a template query you'd like to add!

5.1.0.3 (August, 2023)

VignaMine is sourced from files found on the LIS datastore (https://data.legumeinfo.org/).

Genomic queries, leading to genes and other chromosome features. Read more


Query for genomics:

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Queries on homology, synteny, etc. Read more


Query for comparison:

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Queries on GO terms, etc. Read more


Query for function:

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Queries on gene expression, resulting in gene lists. Read more


Query for expression:

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Queries on genetic data: QTLs, genetic maps, markers, etc. Read more


Query for genetics:

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Queries resulting in publication lists. Read more


Query for publications:

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Perl, Python, Ruby and Java API

perl java python ruby

Access our VignaMine data via our Application Programming Interface (API) too! We provide client libraries in the following languages:

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The Legume Information System (LIS) is a research project of the USDA-ARS:Corn Insects and Crop Genetics Research in Ames, IA.
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